y
Basic Information | |
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Species | Cucumis sativus |
Cazyme ID | Cucsa.156870.2 |
Family | GT47 |
Protein Properties | Length: 342 Molecular Weight: 38859.9 Isoelectric Point: 6.346 |
Chromosome | Chromosome/Scaffold: 01141 Start: 23634 End: 28125 |
Description | Exostosin family protein |
View CDS |
External Links |
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NCBI Taxonomy |
CAZyDB |
Signature Domain Download full data set without filtering | |||
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Family | Start | End | Evalue |
GT47 | 2 | 269 | 0 |
FAAEIFMHRFLLTSPVRTLNPEEADWFYTPVYTTCDLTPNGLPLPFKSPRMMRSAIQLISSNWPYWNRTEGADHFFVVPHDFGACFHYQEEKAIERGILP LLQRATLVQTFGQRNHVCLKEGSITIPPYAPPQKMHAHLIPEKTPRSIFVYFRGLFYDVGNDPEGGYYARGARAAVWENFKDNPLFDISTEHPTTYYEDM QRAVFCLCPLGWAPWSPRLVEAVIFGCIPVIIADDIVLPFADAIPWEEIGVFLDEKDVANLDTILTSI |
Full Sequence |
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Protein Sequence Length: 342 Download |
MFAAEIFMHR FLLTSPVRTL NPEEADWFYT PVYTTCDLTP NGLPLPFKSP RMMRSAIQLI 60 SSNWPYWNRT EGADHFFVVP HDFGACFHYQ EEKAIERGIL PLLQRATLVQ TFGQRNHVCL 120 KEGSITIPPY APPQKMHAHL IPEKTPRSIF VYFRGLFYDV GNDPEGGYYA RGARAAVWEN 180 FKDNPLFDIS TEHPTTYYED MQRAVFCLCP LGWAPWSPRL VEAVIFGCIP VIIADDIVLP 240 FADAIPWEEI GVFLDEKDVA NLDTILTSIP LEMILRKQRL LANPSMKQAM LFPQPAQPGD 300 AFHQVLNGLA RKLPHDRSVY IKAGEKILNW TAGPVGDLKP W* 360 |
Functional Domains Download unfiltered results here | ||||||||
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Cdd ID | Domain | E-Value | Start | End | Length | Domain Description | ||
pfam03016 | Exostosin | 6.0e-72 | 1 | 269 | 275 | + Exostosin family. The EXT family is a family of tumour suppressor genes. Mutations of EXT1 on 8q24.1, EXT2 on 11p11-13, and EXT3 on 19p have been associated with the autosomal dominant disorder known as hereditary multiple exostoses (HME). This is the most common known skeletal dysplasia. The chromosomal locations of other EXT genes suggest association with other forms of neoplasia. EXT1 and EXT2 have both been shown to encode a heparan sulphate polymerase with both D-glucuronyl (GlcA) and N-acetyl-D-glucosaminoglycan (GlcNAC) transferase activities. The nature of the defect in heparan sulphate biosynthesis in HME is unclear. |
Gene Ontology | |
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GO Term | Description |
GO:0016020 | membrane |
Annotations - NR Download unfiltered results here | |||||||
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Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
GenBank | AAM64940.1 | 0 | 1 | 341 | 75 | 415 | unknown [Arabidopsis thaliana] |
DDBJ | BAB10084.1 | 0 | 1 | 341 | 1 | 341 | unnamed protein product [Arabidopsis thaliana] |
RefSeq | NP_568941.1 | 0 | 1 | 341 | 75 | 415 | GUT1; catalytic/ glucuronoxylan glucuronosyltransferase [Arabidopsis thaliana] |
RefSeq | XP_002318180.1 | 0 | 1 | 341 | 77 | 417 | predicted protein [Populus trichocarpa] |
RefSeq | XP_002511079.1 | 0 | 1 | 341 | 77 | 417 | catalytic, putative [Ricinus communis] |
EST Download unfiltered results here | ||||
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Hit | Length | Start | End | EValue |
ES900637 | 308 | 35 | 342 | 0 |
GO846508 | 325 | 18 | 342 | 0 |
GO868810 | 315 | 1 | 315 | 0 |
GO872051 | 309 | 1 | 309 | 0 |
GO868810 | 22 | 317 | 338 | 0.57 |
Sequence Alignments (This image is cropped. Click for full image.) |
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