y
Basic Information | |
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Species | Mimulus guttatus |
Cazyme ID | mgv1a022607m |
Family | GH18 |
Protein Properties | Length: 302 Molecular Weight: 32715.4 Isoelectric Point: 9.4198 |
Chromosome | Chromosome/Scaffold: 51 Start: 1131715 End: 1132620 |
Description | chitinase A |
View CDS |
External Links |
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CAZyDB |
Signature Domain Download full data set without filtering | |||
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Family | Start | End | Evalue |
GH18 | 29 | 249 | 1.3e-25 |
IAVYWGQNGNEGTLAQTCATGRFSYVNIAFLNKFGGGQTPELNLAGHCNPSTNSCRVVSDGIRACQSRGIKVMLSIGGGIGNYSLSSTQDARDFSLYLWH NFLGGGGGSAARPLGDAVLDGIDFDIELGSPLYYDDLVKFLKRFSRRGRKVYVTGAPQCPFPDRLLGAALNTSLFDYVWVQFYNNPPCQYTSGNTVNLKN SWLRWTSSVKAGKIFLGLPAA |
Full Sequence |
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Protein Sequence Length: 302 Download |
METKRELIPP VILLLLLQSF LHTTAASGIA VYWGQNGNEG TLAQTCATGR FSYVNIAFLN 60 KFGGGQTPEL NLAGHCNPST NSCRVVSDGI RACQSRGIKV MLSIGGGIGN YSLSSTQDAR 120 DFSLYLWHNF LGGGGGSAAR PLGDAVLDGI DFDIELGSPL YYDDLVKFLK RFSRRGRKVY 180 VTGAPQCPFP DRLLGAALNT SLFDYVWVQF YNNPPCQYTS GNTVNLKNSW LRWTSSVKAG 240 KIFLGLPAAP QAAGSGFIPA DVLTAEILPV IRKSRKYGGV MLWSKYWDDR SGYSTSIVKS 300 V* 360 |
Functional Domains Download unfiltered results here | ||||||||
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Cdd ID | Domain | E-Value | Start | End | Length | Domain Description | ||
cd06546 | GH18_CTS3_chitinase | 2.0e-7 | 91 | 283 | 216 | + GH18 domain of CTS3 (chitinase 3), an uncharacterized protein from the human fungal pathogen Coccidioides posadasii. CTS3 has a chitinase-like glycosyl hydrolase family 18 (GH18) domain; and has homologs in bacteria as well as fungi. | ||
COG3469 | COG3469 | 1.0e-10 | 90 | 289 | 231 | + Chitinase [Carbohydrate transport and metabolism] | ||
cd02871 | GH18_chitinase_D-like | 2.0e-13 | 54 | 296 | 297 | + GH18 domain of Chitinase D (ChiD). ChiD, a chitinase found in Bacillus circulans, hydrolyzes the 1,4-beta-linkages of N-acetylglucosamine in chitin and chitodextrins. The domain architecture of ChiD includes a catalytic glycosyl hydrolase family 18 (GH18) domain, a chitin-binding domain, and a fibronectin type III domain. The chitin-binding and fibronectin type III domains are located either N-terminal or C-terminal to the catalytic domain. This family includes exochitinase Chi36 from Bacillus cereus. | ||
pfam00704 | Glyco_hydro_18 | 4.0e-30 | 29 | 288 | 336 | + Glycosyl hydrolases family 18. | ||
cd02877 | GH18_hevamine_XipI_class_III | 9.0e-139 | 27 | 297 | 278 | + This conserved domain family includes xylanase inhibitor Xip-I, and the class III plant chitinases such as hevamine, concanavalin B, and PPL2, all of which have a glycosyl hydrolase family 18 (GH18) domain. Hevamine is a class III endochitinase that hydrolyzes the linear polysaccharide chains of chitin and peptidoglycan and is important for defense against pathogenic bacteria and fungi. PPL2 (Parkia platycephala lectin 2) is a class III chitinase from Parkia platycephala seeds that hydrolyzes beta(1-4) glycosidic bonds linking 2-acetoamido-2-deoxy-beta-D-glucopyranose units in chitin. |
Gene Ontology | |
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GO Term | Description |
GO:0004553 | hydrolase activity, hydrolyzing O-glycosyl compounds |
GO:0005975 | carbohydrate metabolic process |
Annotations - NR Download unfiltered results here | |||||||
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Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
GenBank | AAN37389.1 | 0 | 7 | 301 | 6 | 295 | AF435026_1 class III chitinase [Capsicum annuum] |
GenBank | AAN37390.1 | 0 | 7 | 301 | 6 | 295 | AF435027_1 class III chitinase [Capsicum annuum] |
GenBank | AAN37392.1 | 0 | 7 | 301 | 6 | 295 | AF435029_1 class III chitinase [Capsicum annuum] |
RefSeq | XP_002331830.1 | 0 | 23 | 301 | 23 | 296 | predicted protein [Populus trichocarpa] |
RefSeq | XP_002513612.1 | 0 | 26 | 301 | 24 | 297 | hevamine-A precursor, putative [Ricinus communis] |
Annotations - PDB Download unfiltered results here | |||||||
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Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
PDB | 2hvm_A | 0 | 28 | 301 | 2 | 273 | A Chain A, High Resolution Structure Of E.coli Wrba With Fmn |
PDB | 1llo_A | 0 | 28 | 301 | 2 | 273 | A Chain A, High Resolution Structure Of E.coli Wrba With Fmn |
PDB | 1hvq_A | 0 | 28 | 301 | 2 | 273 | A Chain A, Crystal Structures Of Hevamine, A Plant Defence Protein With Chitinase And Lysozyme Activity, And Its Complex With An Inhibitor |
PDB | 1kr0_A | 0 | 28 | 301 | 2 | 273 | A Chain A, Hevamine Mutant D125aY183F IN COMPLEX WITH TETRA-Nag |
PDB | 1kr1_A | 0 | 28 | 301 | 2 | 273 | A Chain A, Hevamine Mutant D125aE127A IN COMPLEX WITH TETRA-Nag |