y
Basic Information | |
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Species | Ricinus communis |
Cazyme ID | 29595.m000280 |
Family | GH18 |
Protein Properties | Length: 298 Molecular Weight: 31483.7 Isoelectric Point: 5.7635 |
Chromosome | Chromosome/Scaffold: 29595 Start: 23438 End: 24334 |
Description | chitinase A |
View CDS |
External Links |
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NCBI Taxonomy |
Plaza |
CAZyDB |
Signature Domain Download full data set without filtering | |||
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Family | Start | End | Evalue |
GH18 | 28 | 260 | 1.1e-32 |
IAIYWGQNGNEGTLAETCATGNYAFVNIAFLPTFGNGQTPMINLAGHCDPYSNGCTGLSSDIKSCQAKGIKVMLSIGGGAGSYYLASAEDARQVATYLWN NFLGGNSSSRPLGPAVLDGIDFDIEGGTTQHWDDLARFLSAYSKSGKKVYLSAAPQCPFPDAWVGNAMKTGLFDYVWVQFYNNPPCQYSSGSMINLEDAW KQWISSIPANKIFLGLPAAPAAAGSGFIPAADL |
Full Sequence |
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Protein Sequence Length: 298 Download |
MASGSAISLI FFISVVLTLI LGSEAGGIAI YWGQNGNEGT LAETCATGNY AFVNIAFLPT 60 FGNGQTPMIN LAGHCDPYSN GCTGLSSDIK SCQAKGIKVM LSIGGGAGSY YLASAEDARQ 120 VATYLWNNFL GGNSSSRPLG PAVLDGIDFD IEGGTTQHWD DLARFLSAYS KSGKKVYLSA 180 APQCPFPDAW VGNAMKTGLF DYVWVQFYNN PPCQYSSGSM INLEDAWKQW ISSIPANKIF 240 LGLPAAPAAA GSGFIPAADL TSKVLPAIKG SAKYGGVMLW SKYYDDQSGY SKAIKNSV 300 |
Functional Domains Download unfiltered results here | ||||||||
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Cdd ID | Domain | E-Value | Start | End | Length | Domain Description | ||
pfam00704 | Glyco_hydro_18 | 3.0e-24 | 26 | 238 | 240 | + Glycosyl hydrolases family 18. | ||
cd02877 | GH18_hevamine_XipI_class_III | 4.0e-112 | 26 | 296 | 280 | + This conserved domain family includes xylanase inhibitor Xip-I, and the class III plant chitinases such as hevamine, concanavalin B, and PPL2, all of which have a glycosyl hydrolase family 18 (GH18) domain. Hevamine is a class III endochitinase that hydrolyzes the linear polysaccharide chains of chitin and peptidoglycan and is important for defense against pathogenic bacteria and fungi. PPL2 (Parkia platycephala lectin 2) is a class III chitinase from Parkia platycephala seeds that hydrolyzes beta(1-4) glycosidic bonds linking 2-acetoamido-2-deoxy-beta-D-glucopyranose units in chitin. |
Gene Ontology | |
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GO Term | Description |
GO:0004553 | hydrolase activity, hydrolyzing O-glycosyl compounds |
GO:0005975 | carbohydrate metabolic process |
Annotations - NR Download unfiltered results here | |||||||
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Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
GenBank | ABF82271.1 | 0 | 1 | 298 | 1 | 298 | class III chitinase [Panax ginseng] |
RefSeq | XP_002279147.1 | 0 | 22 | 298 | 22 | 298 | PREDICTED: hypothetical protein [Vitis vinifera] |
RefSeq | XP_002301383.1 | 0 | 1 | 298 | 1 | 298 | predicted protein [Populus trichocarpa] |
RefSeq | XP_002320164.1 | 0 | 1 | 298 | 3 | 300 | predicted protein [Populus trichocarpa] |
RefSeq | XP_002530928.1 | 0 | 24 | 298 | 24 | 298 | hevamine-A precursor, putative [Ricinus communis] |
Annotations - PDB Download unfiltered results here | |||||||
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Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
PDB | 2hvm_A | 0 | 26 | 298 | 1 | 273 | A Chain A, Structure Of The Complex Of A Mitotic Kinesin With Its Calcium Binding Regulator |
PDB | 1llo_A | 0 | 26 | 298 | 1 | 273 | A Chain A, Structure Of The Complex Of A Mitotic Kinesin With Its Calcium Binding Regulator |
PDB | 1hvq_A | 0 | 26 | 298 | 1 | 273 | A Chain A, Crystal Structures Of Hevamine, A Plant Defence Protein With Chitinase And Lysozyme Activity, And Its Complex With An Inhibitor |
PDB | 1kr0_A | 0 | 26 | 298 | 1 | 273 | A Chain A, Hevamine Mutant D125aY183F IN COMPLEX WITH TETRA-Nag |
PDB | 1kr1_A | 0 | 26 | 298 | 1 | 273 | A Chain A, Hevamine Mutant D125aE127A IN COMPLEX WITH TETRA-Nag |