y
Basic Information | |
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Species | Glycine max |
Cazyme ID | Glyma09g23136.1 |
Family | GH18 |
Protein Properties | Length: 288 Molecular Weight: 30283.7 Isoelectric Point: 4.0925 |
Chromosome | Chromosome/Scaffold: 09 Start: 28483643 End: 28485091 |
Description | chitinase A |
View CDS |
External Links |
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NCBI Taxonomy |
Plaza |
CAZyDB |
Signature Domain Download full data set without filtering | |||
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Family | Start | End | Evalue |
GH18 | 29 | 235 | 1.7e-24 |
IAVYWGQNGGEGTLAEACNTGNYQYVNIAFLSTFGNGQTPQLNLAGHCDPNNNGCTGLSSDINTCQDLGIKVLLSLGGGAGSYSLSSADDATQLANYLWE NFLGGQTGSGPLGDVILDGIDFDIESGGTSAHRVRVYLSAAPQCIIPDAHLDAAIQTGLFDYVWVQFYNNPSCQYSSGNTNDLINSWNQWITVPASLVFM GLPASEA |
Full Sequence |
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Protein Sequence Length: 288 Download |
MKTPNKASLL LFPLLSLSLF INHSHAAGIA VYWGQNGGEG TLAEACNTGN YQYVNIAFLS 60 TFGNGQTPQL NLAGHCDPNN NGCTGLSSDI NTCQDLGIKV LLSLGGGAGS YSLSSADDAT 120 QLANYLWENF LGGQTGSGPL GDVILDGIDF DIESGGTSAH RVRVYLSAAP QCIIPDAHLD 180 AAIQTGLFDY VWVQFYNNPS CQYSSGNTND LINSWNQWIT VPASLVFMGL PASEAAAPSG 240 GFVPADVLTS QILPVIKQSS NYGGVMLWDR FNDVQNGYSN AIIGSVN* 300 |
Functional Domains Download unfiltered results here | ||||||||
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Cdd ID | Domain | E-Value | Start | End | Length | Domain Description | ||
cd06546 | GH18_CTS3_chitinase | 6.0e-5 | 138 | 272 | 168 | + GH18 domain of CTS3 (chitinase 3), an uncharacterized protein from the human fungal pathogen Coccidioides posadasii. CTS3 has a chitinase-like glycosyl hydrolase family 18 (GH18) domain; and has homologs in bacteria as well as fungi. | ||
pfam00704 | Glyco_hydro_18 | 1.0e-23 | 29 | 273 | 353 | + Glycosyl hydrolases family 18. | ||
cd02877 | GH18_hevamine_XipI_class_III | 2.0e-114 | 27 | 284 | 281 | + This conserved domain family includes xylanase inhibitor Xip-I, and the class III plant chitinases such as hevamine, concanavalin B, and PPL2, all of which have a glycosyl hydrolase family 18 (GH18) domain. Hevamine is a class III endochitinase that hydrolyzes the linear polysaccharide chains of chitin and peptidoglycan and is important for defense against pathogenic bacteria and fungi. PPL2 (Parkia platycephala lectin 2) is a class III chitinase from Parkia platycephala seeds that hydrolyzes beta(1-4) glycosidic bonds linking 2-acetoamido-2-deoxy-beta-D-glucopyranose units in chitin. |
Gene Ontology | |
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GO Term | Description |
GO:0004553 | hydrolase activity, hydrolyzing O-glycosyl compounds |
GO:0005975 | carbohydrate metabolic process |
Annotations - NR Download unfiltered results here | |||||||
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Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
GenBank | ACU21507.1 | 0 | 1 | 286 | 1 | 297 | unknown [Glycine max] |
GenBank | ACU24254.1 | 0 | 1 | 286 | 1 | 297 | unknown [Glycine max] |
DDBJ | BAA08708.1 | 0 | 1 | 287 | 1 | 298 | chitinase [Psophocarpus tetragonolobus] |
DDBJ | BAA77675.1 | 0 | 1 | 287 | 1 | 299 | Chitinase III-A [Glycine max] |
DDBJ | BAA77676.1 | 0 | 1 | 287 | 1 | 298 | acidic chitinase [Glycine max] |
Annotations - PDB Download unfiltered results here | |||||||
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Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
PDB | 2gsj_A | 0 | 28 | 286 | 2 | 271 | A Chain A, Cdna Cloning And 1.75a Crystal Structure Determination Of Ppl2, A Novel Chimerolectin From Parkia Platycephala Seeds Exhibiting Endochitinolytic Activity |
PDB | 2hvm_A | 0 | 28 | 286 | 2 | 273 | A Chain A, Cdna Cloning And 1.75a Crystal Structure Determination Of Ppl2, A Novel Chimerolectin From Parkia Platycephala Seeds Exhibiting Endochitinolytic Activity |
PDB | 1llo_A | 0 | 28 | 286 | 2 | 273 | A Chain A, Cdna Cloning And 1.75a Crystal Structure Determination Of Ppl2, A Novel Chimerolectin From Parkia Platycephala Seeds Exhibiting Endochitinolytic Activity |
PDB | 1hvq_A | 0 | 28 | 286 | 2 | 273 | A Chain A, Crystal Structures Of Hevamine, A Plant Defence Protein With Chitinase And Lysozyme Activity, And Its Complex With An Inhibitor |
PDB | 1kr0_A | 0 | 28 | 286 | 2 | 273 | A Chain A, Hevamine Mutant D125aY183F IN COMPLEX WITH TETRA-Nag |
Metabolic Pathways | |||
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Pathway Name | Reaction | EC | Protein Name |
chitin degradation II | 3.2.1.14-RXN | EC-3.2.1.14 | chitinase |
chitin degradation II | RXN-12623 | EC-3.2.1.14 | chitinase |
chitin degradation II | RXN-12624 | EC-3.2.1.14 | chitinase |
chitin degradation III (carnivorous plants) | 3.2.1.14-RXN | EC-3.2.1.14 | chitinase |