Genome Details
Selected Rep_genome_ID: ShaoY_2019_ERR3405637_bin.3
Total Genomes Found: 5
Total Genomes Found: 5
Read Mapping - JBrowse
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Peptostreptococcales
Family
Peptostreptococcaceae
Genus
Intestinibacter
Species
Intestinibacter sp900540355
Genomes Table
| Genome ID | Genome Length | Completeness | Contamination | Country | Continent | Source |
|---|---|---|---|---|---|---|
| CGMR043392 | 3,024,837 | 92.61% | 0% | China | Asia | CGMR |
| HRGMv2_3252 | 3,021,197 | 100% | 0% | United Kingdom | Europe | HRGM |
| MGYG000001007 | 3,037,076 | 98.94% | 0.47% | Austria | Europe | UHGG |
| REFINED_METABAT215_TOP10_CONTIGS_1500_ASSEMBLY_K77_MERGED__Nepal_MoBio_Fiber-Hadza-Nepal_H_21_RAJ1012YZ.15 | 2,787,906 | 98.15% | 0% | NA | Africa | Hadza |
| ShaoY_2019_ERR3405637_bin.3 | 2,995,879 | 100% | 0% | UK | Europe | ELGG |
Analysis Charts
CGCs
| Gene Cluster ID | Family Name | In Labeled Family | Gene Count | CAZyme Count | Substrate |
|---|---|---|---|---|---|
| ShaoY_2019_ERR3405637_bin.3_CGC12 | CGCFAM_00012 | Yes | 4 | 1 | host glycan/beta-glucan |
| ShaoY_2019_ERR3405637_bin.3_CGC9 | CGCFAM_00013 | Yes | 11 | 1 | |
| ShaoY_2019_ERR3405637_bin.3_CGC8 | CGCFAM_00014 | Yes | 4 | 1 | host glycan |
| ShaoY_2019_ERR3405637_bin.3_CGC25 | CGCFAM_00040 | Yes | 8 | 5 | |
| ShaoY_2019_ERR3405637_bin.3_CGC19 | CGCFAM_00538 | Yes | 6 | 2 | |
| ShaoY_2019_ERR3405637_bin.3_CGC16 | CGCFAM_01080 | Yes | 7 | 1 | fructan |
| ShaoY_2019_ERR3405637_bin.3_CGC5 | CGCFAM_01275 | Yes | 10 | 6 | |
| ShaoY_2019_ERR3405637_bin.3_CGC22 | CGCFAM_02738 | Yes | 7 | 1 | |
| ShaoY_2019_ERR3405637_bin.3_CGC10 | CGCFAM_03784 | Yes | 4 | 1 | |
| ShaoY_2019_ERR3405637_bin.3_CGC1 | CGCFAM_04900 | Yes | 7 | 2 | |
| ShaoY_2019_ERR3405637_bin.3_CGC7 | CGCFAM_05661 | Yes | 10 | 4 | |
| ShaoY_2019_ERR3405637_bin.3_CGC3 | CGCFAM_10340 | Yes | 3 | 1 |
Top CAZyme Families