Cluster: ShaoY_2019_ERR3405637_bin.3_CGC10
🧬 Cluster Details
- Gene Count: 4
- CAZyme Count: 1
- Substrate:
- Genome ID: ShaoY_2019_ERR3405637_bin.3
- CGC Family ID: CGCFAM_03784
- Continent: Europe
- Source Study: Zeng et al., 2022 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | ShaoY_2019_ERR3405637_bin.3_k141_3251 | ShaoY_2019_ERR3405637_bin.3_k141_3251_102 | 124794 | 126212 | + | 2.A.2.3.1 |
| pfam | ShaoY_2019_ERR3405637_bin.3_k141_3251 | ShaoY_2019_ERR3405637_bin.3_k141_3251_103 | 126369 | 127418 | + | AP_endonuc_2 | UxuA |
| pfam | ShaoY_2019_ERR3405637_bin.3_k141_3251 | ShaoY_2019_ERR3405637_bin.3_k141_3251_104 | 127505 | 128350 | + | adh_short | adh_short_C2 |
| CAZyme | ShaoY_2019_ERR3405637_bin.3_k141_3251 | ShaoY_2019_ERR3405637_bin.3_k141_3251_105 | 128475 | 130250 | + | GH3 |
Gene ID: ShaoY_2019_ERR3405637_bin.3_k141_3251_102
Type: TC
Location: 124794 - 126212 (+)
Type: TC
Location: 124794 - 126212 (+)
Gene ID: ShaoY_2019_ERR3405637_bin.3_k141_3251_103
Type: pfam
Location: 126369 - 127418 (+)
Type: pfam
Location: 126369 - 127418 (+)
Gene ID: ShaoY_2019_ERR3405637_bin.3_k141_3251_104
Type: pfam
Location: 127505 - 128350 (+)
Type: pfam
Location: 127505 - 128350 (+)
Gene ID: ShaoY_2019_ERR3405637_bin.3_k141_3251_105
Type: CAZyme
Location: 128475 - 130250 (+)
Type: CAZyme
Location: 128475 - 130250 (+)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Peptostreptococcales
Family
Peptostreptococcaceae
Genus
Intestinibacter
Species
Intestinibacter sp900540355
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.