Cluster: ShaoY_2019_ERR3405637_bin.3_CGC22
🧬 Cluster Details
- Gene Count: 7
- CAZyme Count: 1
- Substrate:
- Genome ID: ShaoY_2019_ERR3405637_bin.3
- CGC Family ID: CGCFAM_02738
- Continent: Europe
- Source Study: Zeng et al., 2022 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | ShaoY_2019_ERR3405637_bin.3_k141_7560 | ShaoY_2019_ERR3405637_bin.3_k141_7560_164 | 173506 | 174612 | - | 4.D.2.1.5 |
| pfam | ShaoY_2019_ERR3405637_bin.3_k141_7560 | ShaoY_2019_ERR3405637_bin.3_k141_7560_165 | 175008 | 176867 | - | AAA_15 | AAA_21 |
| TC | ShaoY_2019_ERR3405637_bin.3_k141_7560 | ShaoY_2019_ERR3405637_bin.3_k141_7560_166 | 177009 | 178256 | - | 2.A.40.1.4 |
| STP | ShaoY_2019_ERR3405637_bin.3_k141_7560 | ShaoY_2019_ERR3405637_bin.3_k141_7560_167 | 178323 | 178856 | - | Pribosyltran |
| pfam | ShaoY_2019_ERR3405637_bin.3_k141_7560 | ShaoY_2019_ERR3405637_bin.3_k141_7560_168 | 179099 | 180031 | - | PseudoU_synth_2 | S4 |
| TC | ShaoY_2019_ERR3405637_bin.3_k141_7560 | ShaoY_2019_ERR3405637_bin.3_k141_7560_169 | 180112 | 180564 | - | 9.B.105.1.5 |
| CAZyme | ShaoY_2019_ERR3405637_bin.3_k141_7560 | ShaoY_2019_ERR3405637_bin.3_k141_7560_170 | 180681 | 181421 | - | CE4 |
Gene ID: ShaoY_2019_ERR3405637_bin.3_k141_7560_164
Type: TC
Location: 173506 - 174612 (-)
Type: TC
Location: 173506 - 174612 (-)
Gene ID: ShaoY_2019_ERR3405637_bin.3_k141_7560_165
Type: pfam
Location: 175008 - 176867 (-)
Type: pfam
Location: 175008 - 176867 (-)
Gene ID: ShaoY_2019_ERR3405637_bin.3_k141_7560_166
Type: TC
Location: 177009 - 178256 (-)
Type: TC
Location: 177009 - 178256 (-)
Gene ID: ShaoY_2019_ERR3405637_bin.3_k141_7560_167
Type: STP
Location: 178323 - 178856 (-)
Type: STP
Location: 178323 - 178856 (-)
Gene ID: ShaoY_2019_ERR3405637_bin.3_k141_7560_168
Type: pfam
Location: 179099 - 180031 (-)
Type: pfam
Location: 179099 - 180031 (-)
Gene ID: ShaoY_2019_ERR3405637_bin.3_k141_7560_169
Type: TC
Location: 180112 - 180564 (-)
Type: TC
Location: 180112 - 180564 (-)
Gene ID: ShaoY_2019_ERR3405637_bin.3_k141_7560_170
Type: CAZyme
Location: 180681 - 181421 (-)
Type: CAZyme
Location: 180681 - 181421 (-)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Peptostreptococcales
Family
Peptostreptococcaceae
Genus
Intestinibacter
Species
Intestinibacter sp900540355
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.