Cluster: ShaoY_2019_ERR3405637_bin.3_CGC19
🧬 Cluster Details
- Gene Count: 6
- CAZyme Count: 2
- Substrate:
- Genome ID: ShaoY_2019_ERR3405637_bin.3
- CGC Family ID: CGCFAM_00538
- Continent: Europe
- Source Study: Zeng et al., 2022 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | ShaoY_2019_ERR3405637_bin.3_k141_7113 | ShaoY_2019_ERR3405637_bin.3_k141_7113_2 | 197 | 1936 | - | 3.A.1.121.4 |
| NULL(UNKNOWN) | ShaoY_2019_ERR3405637_bin.3_k141_7113 | ShaoY_2019_ERR3405637_bin.3_k141_7113_3 | 2186 | 2596 | + |
NULL(UNKNOWN)
[View Structural Homologs] |
| TF | ShaoY_2019_ERR3405637_bin.3_k141_7113 | ShaoY_2019_ERR3405637_bin.3_k141_7113_4 | 2710 | 3933 | - | HTH_AraC | HTH_AraC |
| CAZyme | ShaoY_2019_ERR3405637_bin.3_k141_7113 | ShaoY_2019_ERR3405637_bin.3_k141_7113_5 | 4193 | 6433 | + | GH2 |
| CAZyme | ShaoY_2019_ERR3405637_bin.3_k141_7113 | ShaoY_2019_ERR3405637_bin.3_k141_7113_6 | 6723 | 8963 | + | GH2 |
| TC | ShaoY_2019_ERR3405637_bin.3_k141_7113 | ShaoY_2019_ERR3405637_bin.3_k141_7113_7 | 9257 | 10315 | + | 3.A.1.11.8 |
Gene ID: ShaoY_2019_ERR3405637_bin.3_k141_7113_2
Type: TC
Location: 197 - 1936 (-)
Type: TC
Location: 197 - 1936 (-)
Gene ID: ShaoY_2019_ERR3405637_bin.3_k141_7113_3
Type:
Location: 2186 - 2596 (+)
Type:
Location: 2186 - 2596 (+)
Gene ID: ShaoY_2019_ERR3405637_bin.3_k141_7113_4
Type: TF
Location: 2710 - 3933 (-)
Type: TF
Location: 2710 - 3933 (-)
Gene ID: ShaoY_2019_ERR3405637_bin.3_k141_7113_5
Type: CAZyme
Location: 4193 - 6433 (+)
Type: CAZyme
Location: 4193 - 6433 (+)
Gene ID: ShaoY_2019_ERR3405637_bin.3_k141_7113_6
Type: CAZyme
Location: 6723 - 8963 (+)
Type: CAZyme
Location: 6723 - 8963 (+)
Gene ID: ShaoY_2019_ERR3405637_bin.3_k141_7113_7
Type: TC
Location: 9257 - 10315 (+)
Type: TC
Location: 9257 - 10315 (+)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Peptostreptococcales
Family
Peptostreptococcaceae
Genus
Intestinibacter
Species
Intestinibacter sp900540355
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.