Cluster: ShaoY_2019_ERR3405637_bin.3_CGC7
🧬 Cluster Details
- Gene Count: 10
- CAZyme Count: 4
- Substrate:
- Genome ID: ShaoY_2019_ERR3405637_bin.3
- CGC Family ID: CGCFAM_05661
- Continent: Europe
- Source Study: Zeng et al., 2022 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | ShaoY_2019_ERR3405637_bin.3_k141_3067 | ShaoY_2019_ERR3405637_bin.3_k141_3067_154 | 163731 | 164705 | + | 8.A.21.2.2 |
| CAZyme | ShaoY_2019_ERR3405637_bin.3_k141_3067 | ShaoY_2019_ERR3405637_bin.3_k141_3067_155 | 164927 | 167182 | + | GH13_9 |
| pfam | ShaoY_2019_ERR3405637_bin.3_k141_3067 | ShaoY_2019_ERR3405637_bin.3_k141_3067_156 | 167393 | 168523 | + | NTP_transferase | Hexapep_GlmU |
| pfam | ShaoY_2019_ERR3405637_bin.3_k141_3067 | ShaoY_2019_ERR3405637_bin.3_k141_3067_157 | 168597 | 169727 | + | NTP_transferase | Hexapep_GlmU |
| CAZyme | ShaoY_2019_ERR3405637_bin.3_k141_3067 | ShaoY_2019_ERR3405637_bin.3_k141_3067_158 | 169744 | 171180 | + | GT5 |
| CAZyme | ShaoY_2019_ERR3405637_bin.3_k141_3067 | ShaoY_2019_ERR3405637_bin.3_k141_3067_159 | 171354 | 173780 | + | GT35 |
| CAZyme | ShaoY_2019_ERR3405637_bin.3_k141_3067 | ShaoY_2019_ERR3405637_bin.3_k141_3067_160 | 173799 | 175667 | + | GH13_39 |
| TC | ShaoY_2019_ERR3405637_bin.3_k141_3067 | ShaoY_2019_ERR3405637_bin.3_k141_3067_161 | 175746 | 176171 | - | 3.A.7.7.1 |
| STP | ShaoY_2019_ERR3405637_bin.3_k141_3067 | ShaoY_2019_ERR3405637_bin.3_k141_3067_162 | 176350 | 178251 | + | HATPase_c | HisKA |
| TC | ShaoY_2019_ERR3405637_bin.3_k141_3067 | ShaoY_2019_ERR3405637_bin.3_k141_3067_163 | 178378 | 179229 | + | 3.A.1.132.3 |
Gene ID: ShaoY_2019_ERR3405637_bin.3_k141_3067_154
Type: TC
Location: 163731 - 164705 (+)
Type: TC
Location: 163731 - 164705 (+)
Gene ID: ShaoY_2019_ERR3405637_bin.3_k141_3067_155
Type: CAZyme
Location: 164927 - 167182 (+)
Type: CAZyme
Location: 164927 - 167182 (+)
Gene ID: ShaoY_2019_ERR3405637_bin.3_k141_3067_156
Type: pfam
Location: 167393 - 168523 (+)
Type: pfam
Location: 167393 - 168523 (+)
Gene ID: ShaoY_2019_ERR3405637_bin.3_k141_3067_157
Type: pfam
Location: 168597 - 169727 (+)
Type: pfam
Location: 168597 - 169727 (+)
Gene ID: ShaoY_2019_ERR3405637_bin.3_k141_3067_158
Type: CAZyme
Location: 169744 - 171180 (+)
Type: CAZyme
Location: 169744 - 171180 (+)
Gene ID: ShaoY_2019_ERR3405637_bin.3_k141_3067_159
Type: CAZyme
Location: 171354 - 173780 (+)
Type: CAZyme
Location: 171354 - 173780 (+)
Gene ID: ShaoY_2019_ERR3405637_bin.3_k141_3067_160
Type: CAZyme
Location: 173799 - 175667 (+)
Type: CAZyme
Location: 173799 - 175667 (+)
Gene ID: ShaoY_2019_ERR3405637_bin.3_k141_3067_161
Type: TC
Location: 175746 - 176171 (-)
Type: TC
Location: 175746 - 176171 (-)
Gene ID: ShaoY_2019_ERR3405637_bin.3_k141_3067_162
Type: STP
Location: 176350 - 178251 (+)
Type: STP
Location: 176350 - 178251 (+)
Gene ID: ShaoY_2019_ERR3405637_bin.3_k141_3067_163
Type: TC
Location: 178378 - 179229 (+)
Type: TC
Location: 178378 - 179229 (+)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Peptostreptococcales
Family
Peptostreptococcaceae
Genus
Intestinibacter
Species
Intestinibacter sp900540355
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.