Cluster: ShaoY_2019_ERR3405637_bin.3_CGC16
🧬 Cluster Details
- Gene Count: 7
- CAZyme Count: 1
- Substrate: fructan
- Genome ID: ShaoY_2019_ERR3405637_bin.3
- CGC Family ID: CGCFAM_01080
- Continent: Europe
- Source Study: Zeng et al., 2022 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | ShaoY_2019_ERR3405637_bin.3_k141_5370 | ShaoY_2019_ERR3405637_bin.3_k141_5370_16 | 17153 | 18421 | + | 2.A.23.1.5 |
| TF | ShaoY_2019_ERR3405637_bin.3_k141_5370 | ShaoY_2019_ERR3405637_bin.3_k141_5370_17 | 18545 | 19567 | - | LacI |
| TC | ShaoY_2019_ERR3405637_bin.3_k141_5370 | ShaoY_2019_ERR3405637_bin.3_k141_5370_18 | 19755 | 21062 | + | 3.A.1.1.20 |
| TC | ShaoY_2019_ERR3405637_bin.3_k141_5370 | ShaoY_2019_ERR3405637_bin.3_k141_5370_19 | 21068 | 21952 | + | 3.A.1.1.20 |
| TC | ShaoY_2019_ERR3405637_bin.3_k141_5370 | ShaoY_2019_ERR3405637_bin.3_k141_5370_20 | 21956 | 22807 | + | 3.A.1.1.20 |
| TC | ShaoY_2019_ERR3405637_bin.3_k141_5370 | ShaoY_2019_ERR3405637_bin.3_k141_5370_21 | 22811 | 23932 | + | 3.A.1.1.27 |
| CAZyme | ShaoY_2019_ERR3405637_bin.3_k141_5370 | ShaoY_2019_ERR3405637_bin.3_k141_5370_22 | 23932 | 25281 | + | GH32 |
Gene ID: ShaoY_2019_ERR3405637_bin.3_k141_5370_16
Type: TC
Location: 17153 - 18421 (+)
Type: TC
Location: 17153 - 18421 (+)
Gene ID: ShaoY_2019_ERR3405637_bin.3_k141_5370_17
Type: TF
Location: 18545 - 19567 (-)
Type: TF
Location: 18545 - 19567 (-)
Gene ID: ShaoY_2019_ERR3405637_bin.3_k141_5370_18
Type: TC
Location: 19755 - 21062 (+)
Type: TC
Location: 19755 - 21062 (+)
Gene ID: ShaoY_2019_ERR3405637_bin.3_k141_5370_19
Type: TC
Location: 21068 - 21952 (+)
Type: TC
Location: 21068 - 21952 (+)
Gene ID: ShaoY_2019_ERR3405637_bin.3_k141_5370_20
Type: TC
Location: 21956 - 22807 (+)
Type: TC
Location: 21956 - 22807 (+)
Gene ID: ShaoY_2019_ERR3405637_bin.3_k141_5370_21
Type: TC
Location: 22811 - 23932 (+)
Type: TC
Location: 22811 - 23932 (+)
Gene ID: ShaoY_2019_ERR3405637_bin.3_k141_5370_22
Type: CAZyme
Location: 23932 - 25281 (+)
Type: CAZyme
Location: 23932 - 25281 (+)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Peptostreptococcales
Family
Peptostreptococcaceae
Genus
Intestinibacter
Species
Intestinibacter sp900540355
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.