Cluster: ShaoY_2019_ERR3405637_bin.3_CGC5
🧬 Cluster Details
- Gene Count: 10
- CAZyme Count: 6
- Substrate:
- Genome ID: ShaoY_2019_ERR3405637_bin.3
- CGC Family ID: CGCFAM_01275
- Continent: Europe
- Source Study: Zeng et al., 2022 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | ShaoY_2019_ERR3405637_bin.3_k141_3067 | ShaoY_2019_ERR3405637_bin.3_k141_3067_2 | 1809 | 2531 | + | 8.A.3.1.2 |
| TC | ShaoY_2019_ERR3405637_bin.3_k141_3067 | ShaoY_2019_ERR3405637_bin.3_k141_3067_3 | 2715 | 4598 | + | 9.B.18.2.1 |
| TC | ShaoY_2019_ERR3405637_bin.3_k141_3067 | ShaoY_2019_ERR3405637_bin.3_k141_3067_4 | 4615 | 5250 | + | 9.B.18.1.3 |
| CAZyme | ShaoY_2019_ERR3405637_bin.3_k141_3067 | ShaoY_2019_ERR3405637_bin.3_k141_3067_5 | 5327 | 6349 | + | GT4 |
| CAZyme | ShaoY_2019_ERR3405637_bin.3_k141_3067 | ShaoY_2019_ERR3405637_bin.3_k141_3067_6 | 6346 | 7437 | + | GT4 |
| CAZyme | ShaoY_2019_ERR3405637_bin.3_k141_3067 | ShaoY_2019_ERR3405637_bin.3_k141_3067_7 | 7452 | 8336 | + | GT2 |
| TC | ShaoY_2019_ERR3405637_bin.3_k141_3067 | ShaoY_2019_ERR3405637_bin.3_k141_3067_8 | 8340 | 9476 | + | 9.B.183.1.9 |
| CAZyme | ShaoY_2019_ERR3405637_bin.3_k141_3067 | ShaoY_2019_ERR3405637_bin.3_k141_3067_9 | 9530 | 10507 | + | GT8 |
| CAZyme | ShaoY_2019_ERR3405637_bin.3_k141_3067 | ShaoY_2019_ERR3405637_bin.3_k141_3067_10 | 10510 | 11709 | + | GT4 |
| CAZyme | ShaoY_2019_ERR3405637_bin.3_k141_3067 | ShaoY_2019_ERR3405637_bin.3_k141_3067_11 | 11711 | 12448 | + | GT32 |
Gene ID: ShaoY_2019_ERR3405637_bin.3_k141_3067_2
Type: TC
Location: 1809 - 2531 (+)
Type: TC
Location: 1809 - 2531 (+)
Gene ID: ShaoY_2019_ERR3405637_bin.3_k141_3067_3
Type: TC
Location: 2715 - 4598 (+)
Type: TC
Location: 2715 - 4598 (+)
Gene ID: ShaoY_2019_ERR3405637_bin.3_k141_3067_4
Type: TC
Location: 4615 - 5250 (+)
Type: TC
Location: 4615 - 5250 (+)
Gene ID: ShaoY_2019_ERR3405637_bin.3_k141_3067_5
Type: CAZyme
Location: 5327 - 6349 (+)
Type: CAZyme
Location: 5327 - 6349 (+)
Gene ID: ShaoY_2019_ERR3405637_bin.3_k141_3067_6
Type: CAZyme
Location: 6346 - 7437 (+)
Type: CAZyme
Location: 6346 - 7437 (+)
Gene ID: ShaoY_2019_ERR3405637_bin.3_k141_3067_7
Type: CAZyme
Location: 7452 - 8336 (+)
Type: CAZyme
Location: 7452 - 8336 (+)
Gene ID: ShaoY_2019_ERR3405637_bin.3_k141_3067_8
Type: TC
Location: 8340 - 9476 (+)
Type: TC
Location: 8340 - 9476 (+)
Gene ID: ShaoY_2019_ERR3405637_bin.3_k141_3067_9
Type: CAZyme
Location: 9530 - 10507 (+)
Type: CAZyme
Location: 9530 - 10507 (+)
Gene ID: ShaoY_2019_ERR3405637_bin.3_k141_3067_10
Type: CAZyme
Location: 10510 - 11709 (+)
Type: CAZyme
Location: 10510 - 11709 (+)
Gene ID: ShaoY_2019_ERR3405637_bin.3_k141_3067_11
Type: CAZyme
Location: 11711 - 12448 (+)
Type: CAZyme
Location: 11711 - 12448 (+)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Peptostreptococcales
Family
Peptostreptococcaceae
Genus
Intestinibacter
Species
Intestinibacter sp900540355
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.