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Genome Details

Selected Rep_genome_ID: ShaoY_2019_ERR3404686_bin.7
Total Genomes Found: 1
Read Mapping - JBrowse
Taxonomic Lineage
Domain
Bacteria
→
Phylum
Pseudomonadota
→
Class
Gammaproteobacteria
→
Order
Enterobacterales
→
Family
Enterobacteriaceae
→
Genus
Pantoea
→
Species
Pantoea astica
Genomes Table
Genome ID Genome Length Completeness Contamination Country Continent Source
ShaoY_2019_ERR3404686_bin.7 4,620,065 98.83% 1.576% UK Europe ELGG
Analysis Charts
CGCs
Gene Cluster ID Family Name In Labeled Family Gene Count CAZyme Count Substrate
ShaoY_2019_ERR3404686_bin.7_CGC21 CGCFAM_00073 Yes 5 2
ShaoY_2019_ERR3404686_bin.7_CGC4 CGCFAM_00293 Yes 7 1
ShaoY_2019_ERR3404686_bin.7_CGC29 CGCFAM_00399 Yes 10 2
ShaoY_2019_ERR3404686_bin.7_CGC14 CGCFAM_00487 Yes 4 1
ShaoY_2019_ERR3404686_bin.7_CGC8 CGCFAM_02219 Yes 12 1
ShaoY_2019_ERR3404686_bin.7_CGC22 CGCFAM_02815 Yes 6 1
ShaoY_2019_ERR3404686_bin.7_CGC41 CGCFAM_03067 Yes 6 1
ShaoY_2019_ERR3404686_bin.7_CGC36 CGCFAM_04026 Yes 5 1
ShaoY_2019_ERR3404686_bin.7_CGC15 CGCFAM_04864 Yes 5 1
ShaoY_2019_ERR3404686_bin.7_CGC44 CGCFAM_05769 Yes 6 3
ShaoY_2019_ERR3404686_bin.7_CGC19 CGCFAM_06067 Yes 9 1
ShaoY_2019_ERR3404686_bin.7_CGC39 CGCFAM_06068 Yes 7 1
ShaoY_2019_ERR3404686_bin.7_CGC20 CGCFAM_06069 Yes 6 1
ShaoY_2019_ERR3404686_bin.7_CGC10 CGCFAM_09871 Yes 5 1
ShaoY_2019_ERR3404686_bin.7_CGC18 CGCFAM_09876 Yes 5 1
ShaoY_2019_ERR3404686_bin.7_CGC45 CGCFAM_10890 Yes 8 2
Top CAZyme Families