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Cluster: ShaoY_2019_ERR3404686_bin.7_CGC4

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
TC ShaoY_2019_ERR3404686_bin.7_k119_1922 ShaoY_2019_ERR3404686_bin.7_k119_1922_2 1114 3144 - 2.A.15.1.4
STP ShaoY_2019_ERR3404686_bin.7_k119_1922 ShaoY_2019_ERR3404686_bin.7_k119_1922_3 3402 3995 + TetR_N
sulfatase ShaoY_2019_ERR3404686_bin.7_k119_1922 ShaoY_2019_ERR3404686_bin.7_k119_1922_4 4010 5482 + S1_6
CAZyme ShaoY_2019_ERR3404686_bin.7_k119_1922 ShaoY_2019_ERR3404686_bin.7_k119_1922_5 5507 7036 + AA3_2
pfam ShaoY_2019_ERR3404686_bin.7_k119_1922 ShaoY_2019_ERR3404686_bin.7_k119_1922_6 6985 7188 + GMC_oxred_C
TC ShaoY_2019_ERR3404686_bin.7_k119_1922 ShaoY_2019_ERR3404686_bin.7_k119_1922_7 7615 7965 + 2.A.7.1.9
TC ShaoY_2019_ERR3404686_bin.7_k119_1922 ShaoY_2019_ERR3404686_bin.7_k119_1922_8 7952 8281 + 2.A.7.1.9
Gene ID: ShaoY_2019_ERR3404686_bin.7_k119_1922_2
Type: TC
Location: 1114 - 3144 (-)
Gene ID: ShaoY_2019_ERR3404686_bin.7_k119_1922_3
Type: STP
Location: 3402 - 3995 (+)
Gene ID: ShaoY_2019_ERR3404686_bin.7_k119_1922_4
Type: sulfatase
Location: 4010 - 5482 (+)
Gene ID: ShaoY_2019_ERR3404686_bin.7_k119_1922_5
Type: CAZyme
Location: 5507 - 7036 (+)
Gene ID: ShaoY_2019_ERR3404686_bin.7_k119_1922_6
Type: pfam
Location: 6985 - 7188 (+)
Gene ID: ShaoY_2019_ERR3404686_bin.7_k119_1922_7
Type: TC
Location: 7615 - 7965 (+)
Gene ID: ShaoY_2019_ERR3404686_bin.7_k119_1922_8
Type: TC
Location: 7952 - 8281 (+)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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