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Cluster: ShaoY_2019_ERR3404686_bin.7_CGC22

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
TC ShaoY_2019_ERR3404686_bin.7_k119_9593 ShaoY_2019_ERR3404686_bin.7_k119_9593_1 2 388 + 8.A.1.1.1
TC ShaoY_2019_ERR3404686_bin.7_k119_9593 ShaoY_2019_ERR3404686_bin.7_k119_9593_2 385 1782 + 2.A.6.2.9
TC ShaoY_2019_ERR3404686_bin.7_k119_9593 ShaoY_2019_ERR3404686_bin.7_k119_9593_3 1976 4180 + 1.B.14.1.15
NULL(UNKNOWN) ShaoY_2019_ERR3404686_bin.7_k119_9593 ShaoY_2019_ERR3404686_bin.7_k119_9593_4 4322 4465 + NULL(UNKNOWN)
[View Structural Homologs]
NULL(UNKNOWN) ShaoY_2019_ERR3404686_bin.7_k119_9593 ShaoY_2019_ERR3404686_bin.7_k119_9593_5 4505 4678 + NULL(UNKNOWN)
[View Structural Homologs]
CAZyme ShaoY_2019_ERR3404686_bin.7_k119_9593 ShaoY_2019_ERR3404686_bin.7_k119_9593_6 4666 5829 - GH1
Gene ID: ShaoY_2019_ERR3404686_bin.7_k119_9593_1
Type: TC
Location: 2 - 388 (+)
Gene ID: ShaoY_2019_ERR3404686_bin.7_k119_9593_2
Type: TC
Location: 385 - 1782 (+)
Gene ID: ShaoY_2019_ERR3404686_bin.7_k119_9593_3
Type: TC
Location: 1976 - 4180 (+)
Gene ID: ShaoY_2019_ERR3404686_bin.7_k119_9593_4
Type:
Location: 4322 - 4465 (+)
Gene ID: ShaoY_2019_ERR3404686_bin.7_k119_9593_5
Type:
Location: 4505 - 4678 (+)
Gene ID: ShaoY_2019_ERR3404686_bin.7_k119_9593_6
Type: CAZyme
Location: 4666 - 5829 (-)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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