Genome Details
Selected Rep_genome_ID: Rep_631
Total Genomes Found: 4
Total Genomes Found: 4
Read Mapping - JBrowse
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Rikenellaceae
Genus
Alistipes
Species
Alistipes dispar
Genomes Table
| Genome ID | Genome Length | Completeness | Contamination | Country | Continent | Source |
|---|---|---|---|---|---|---|
| CGMR002651 | 2,679,472 | 96.31% | 0.16% | China | Asia | CGMR |
| MGYG000002007 | 2,708,946 | 99.52% | 0% | Spain | Europe | UHGG |
| Rep_631 | 2,777,435 | 99.5192% | 0% | NA | NA | WIS |
| SW117_47_sub | 3,207,726 | 99.04% | 1.31% | NA | Africa | H3AfricaPhase2 |
Analysis Charts
CGCs
| Gene Cluster ID | Family Name | In Labeled Family | Gene Count | CAZyme Count | Substrate |
|---|---|---|---|---|---|
| Rep_631_CGC38 | CGCFAM_00003 | Yes | 13 | 6 | |
| Rep_631_CGC3 | CGCFAM_00475 | Yes | 16 | 3 | |
| Rep_631_CGC36 | CGCFAM_00629 | Yes | 7 | 1 | |
| Rep_631_CGC24 | CGCFAM_00734 | Yes | 7 | 2 | |
| Rep_631_CGC13 | CGCFAM_00915 | Yes | 9 | 1 | |
| Rep_631_CGC21 | CGCFAM_00921 | Yes | 4 | 1 | |
| Rep_631_CGC35 | CGCFAM_01387 | Yes | 3 | 2 | |
| Rep_631_CGC2 | CGCFAM_02027 | Yes | 8 | 1 | |
| Rep_631_CGC23 | CGCFAM_02118 | Yes | 5 | 1 | |
| Rep_631_CGC27 | CGCFAM_03098 | Yes | 8 | 6 | |
| Rep_631_CGC14 | CGCFAM_03099 | Yes | 3 | 1 | |
| Rep_631_CGC10 | CGCFAM_03696 | Yes | 11 | 1 | |
| Rep_631_CGC29 | CGCFAM_03850 | Yes | 5 | 4 | |
| Rep_631_CGC37 | CGCFAM_03998 | Yes | 19 | 10 | |
| Rep_631_CGC17 | CGCFAM_04872 | Yes | 6 | 3 | |
| Rep_631_CGC5 | CGCFAM_05992 | Yes | 6 | 2 | |
| Rep_631_CGC25 | CGCFAM_09635 | Yes | 6 | 1 | |
| Rep_631_CGC16 | CGCFAM_11301 | Yes | 3 | 1 |
Top CAZyme Families