Cluster: Rep_631_CGC27
🧬 Cluster Details
- Gene Count: 8
- CAZyme Count: 6
- Substrate:
- Genome ID: Rep_631
- CGC Family ID: CGCFAM_03098
- Continent: NA
- Source Study: Leviatan et al., 2022 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| CAZyme | Rep_631_c_0 | Rep_631_c_0_1603 | 1968204 | 1969133 | + | GT2 |
| CAZyme | Rep_631_c_0 | Rep_631_c_0_1604 | 1969186 | 1970673 | - | GH173 |
| CAZyme | Rep_631_c_0 | Rep_631_c_0_1605 | 1970888 | 1973233 | + | GH26 | GH5_7 |
| CAZyme | Rep_631_c_0 | Rep_631_c_0_1606 | 1973305 | 1974471 | + | GH130_1 |
| TC | Rep_631_c_0 | Rep_631_c_0_1607 | 1974476 | 1975900 | + | 2.A.2.3.6 |
| pfam | Rep_631_c_0 | Rep_631_c_0_1608 | 1975893 | 1977128 | + | GlcNAc_2-epim |
| CAZyme | Rep_631_c_0 | Rep_631_c_0_1609 | 1977301 | 1980162 | - | GH2 |
| CAZyme | Rep_631_c_0 | Rep_631_c_0_1610 | 1980166 | 1981824 | - | GH5 |
Gene ID: Rep_631_c_0_1603
Type: CAZyme
Location: 1968204 - 1969133 (+)
Type: CAZyme
Location: 1968204 - 1969133 (+)
Gene ID: Rep_631_c_0_1604
Type: CAZyme
Location: 1969186 - 1970673 (-)
Type: CAZyme
Location: 1969186 - 1970673 (-)
Gene ID: Rep_631_c_0_1605
Type: CAZyme
Location: 1970888 - 1973233 (+)
Type: CAZyme
Location: 1970888 - 1973233 (+)
Gene ID: Rep_631_c_0_1606
Type: CAZyme
Location: 1973305 - 1974471 (+)
Type: CAZyme
Location: 1973305 - 1974471 (+)
Gene ID: Rep_631_c_0_1607
Type: TC
Location: 1974476 - 1975900 (+)
Type: TC
Location: 1974476 - 1975900 (+)
Gene ID: Rep_631_c_0_1608
Type: pfam
Location: 1975893 - 1977128 (+)
Type: pfam
Location: 1975893 - 1977128 (+)
Gene ID: Rep_631_c_0_1609
Type: CAZyme
Location: 1977301 - 1980162 (-)
Type: CAZyme
Location: 1977301 - 1980162 (-)
Gene ID: Rep_631_c_0_1610
Type: CAZyme
Location: 1980166 - 1981824 (-)
Type: CAZyme
Location: 1980166 - 1981824 (-)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Rikenellaceae
Genus
Alistipes
Species
Alistipes dispar
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.