Cluster: Rep_631_CGC29
🧬 Cluster Details
- Gene Count: 5
- CAZyme Count: 4
- Substrate:
- Genome ID: Rep_631
- CGC Family ID: CGCFAM_03850
- Continent: NA
- Source Study: Leviatan et al., 2022 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| CAZyme | Rep_631_c_0 | Rep_631_c_0_1620 | 1997786 | 1999267 | + | GH30_3 |
| CAZyme | Rep_631_c_0 | Rep_631_c_0_1621 | 1999255 | 2000445 | + | CE1 |
| CAZyme | Rep_631_c_0 | Rep_631_c_0_1622 | 2000458 | 2001597 | + | GH26 |
| CAZyme | Rep_631_c_0 | Rep_631_c_0_1623 | 2001604 | 2002737 | + | GH26 |
| TC | Rep_631_c_0 | Rep_631_c_0_1624 | 2003056 | 2005653 | - | 3.A.9.1.2 |
Gene ID: Rep_631_c_0_1620
Type: CAZyme
Location: 1997786 - 1999267 (+)
Type: CAZyme
Location: 1997786 - 1999267 (+)
Gene ID: Rep_631_c_0_1621
Type: CAZyme
Location: 1999255 - 2000445 (+)
Type: CAZyme
Location: 1999255 - 2000445 (+)
Gene ID: Rep_631_c_0_1622
Type: CAZyme
Location: 2000458 - 2001597 (+)
Type: CAZyme
Location: 2000458 - 2001597 (+)
Gene ID: Rep_631_c_0_1623
Type: CAZyme
Location: 2001604 - 2002737 (+)
Type: CAZyme
Location: 2001604 - 2002737 (+)
Gene ID: Rep_631_c_0_1624
Type: TC
Location: 2003056 - 2005653 (-)
Type: TC
Location: 2003056 - 2005653 (-)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Rikenellaceae
Genus
Alistipes
Species
Alistipes dispar
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.