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Cluster: Rep_631_CGC2

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
CAZyme Rep_631_c_0 Rep_631_c_0_86 113695 115749 + GH36
TC Rep_631_c_0 Rep_631_c_0_87 115784 118768 + 1.B.14.6.1
TC Rep_631_c_0 Rep_631_c_0_88 118793 120475 + 8.A.46.1.5
NULL(UNKNOWN) Rep_631_c_0 Rep_631_c_0_89 120510 121937 + NULL(UNKNOWN)
[View Structural Homologs]
pfam Rep_631_c_0 Rep_631_c_0_90 122046 123443 + DUF4832 | DUF4874
TC Rep_631_c_0 Rep_631_c_0_91 123454 124338 + 2.A.7.18.4
NULL(UNKNOWN) Rep_631_c_0 Rep_631_c_0_92 124490 126025 - NULL(UNKNOWN)
[View Structural Homologs]
TC Rep_631_c_0 Rep_631_c_0_93 126559 129549 + 1.B.14.6.1
Gene ID: Rep_631_c_0_86
Type: CAZyme
Location: 113695 - 115749 (+)
Gene ID: Rep_631_c_0_87
Type: TC
Location: 115784 - 118768 (+)
Gene ID: Rep_631_c_0_88
Type: TC
Location: 118793 - 120475 (+)
Gene ID: Rep_631_c_0_89
Type:
Location: 120510 - 121937 (+)
Gene ID: Rep_631_c_0_90
Type: pfam
Location: 122046 - 123443 (+)
Gene ID: Rep_631_c_0_91
Type: TC
Location: 123454 - 124338 (+)
Gene ID: Rep_631_c_0_92
Type:
Location: 124490 - 126025 (-)
Gene ID: Rep_631_c_0_93
Type: TC
Location: 126559 - 129549 (+)

Taxonomic Lineage

Domain
Bacteria
→
Phylum
Bacteroidota
→
Class
Bacteroidia
→
Order
Bacteroidales
→
Family
Rikenellaceae
→
Genus
Alistipes
→
Species
Alistipes dispar

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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