dbCAN Logo

Cluster: Rep_631_CGC13

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
CAZyme Rep_631_c_0 Rep_631_c_0_859 1064417 1067089 + CBM67 | GH78
TC Rep_631_c_0 Rep_631_c_0_860 1067237 1068142 - 3.A.2.1.5
TC Rep_631_c_0 Rep_631_c_0_861 1068149 1069732 - 3.A.2.1.3
pfam Rep_631_c_0 Rep_631_c_0_862 1069736 1070290 - OSCP
pfam Rep_631_c_0 Rep_631_c_0_863 1070294 1070806 - ATP-synt_B
TC Rep_631_c_0 Rep_631_c_0_864 1070828 1071040 - 3.A.2.1.6
TC Rep_631_c_0 Rep_631_c_0_865 1071123 1072268 - 3.A.2.1.7
pfam Rep_631_c_0 Rep_631_c_0_866 1072275 1072535 - ATP-synt_DE_N
TC Rep_631_c_0 Rep_631_c_0_867 1072551 1074071 - 3.A.2.1.2
Gene ID: Rep_631_c_0_859
Type: CAZyme
Location: 1064417 - 1067089 (+)
Gene ID: Rep_631_c_0_860
Type: TC
Location: 1067237 - 1068142 (-)
Gene ID: Rep_631_c_0_861
Type: TC
Location: 1068149 - 1069732 (-)
Gene ID: Rep_631_c_0_862
Type: pfam
Location: 1069736 - 1070290 (-)
Gene ID: Rep_631_c_0_863
Type: pfam
Location: 1070294 - 1070806 (-)
Gene ID: Rep_631_c_0_864
Type: TC
Location: 1070828 - 1071040 (-)
Gene ID: Rep_631_c_0_865
Type: TC
Location: 1071123 - 1072268 (-)
Gene ID: Rep_631_c_0_866
Type: pfam
Location: 1072275 - 1072535 (-)
Gene ID: Rep_631_c_0_867
Type: TC
Location: 1072551 - 1074071 (-)

Taxonomic Lineage

Domain
Bacteria
→
Phylum
Bacteroidota
→
Class
Bacteroidia
→
Order
Bacteroidales
→
Family
Rikenellaceae
→
Genus
Alistipes
→
Species
Alistipes dispar

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

Loading chart...

No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

← Back to Cluster List