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Cluster: Rep_631_CGC10

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
TC Rep_631_c_0 Rep_631_c_0_703 877552 878292 - 3.A.1.140.1
CAZyme Rep_631_c_0 Rep_631_c_0_704 879070 881256 - GH92
STP Rep_631_c_0 Rep_631_c_0_705 881630 882817 + Aminotran_1_2
pfam Rep_631_c_0 Rep_631_c_0_706 882930 884111 - ATP-grasp | CPSase_L_D2 | Dala_Dala_lig_C | PurT_C | RS_preATP-grasp-like
TC Rep_631_c_0 Rep_631_c_0_707 884134 885798 - 2.A.81.1.2
pfam Rep_631_c_0 Rep_631_c_0_708 885928 886623 - LrgB
pfam Rep_631_c_0 Rep_631_c_0_709 886613 886984 - LrgA
TC Rep_631_c_0 Rep_631_c_0_710 887278 889842 - 9.A.8.1.6
TC Rep_631_c_0 Rep_631_c_0_711 889903 891402 - 2.A.6.2.10
TC Rep_631_c_0 Rep_631_c_0_712 891399 894536 - 2.A.6.2.16
TC Rep_631_c_0 Rep_631_c_0_713 894541 895647 - 2.A.6.2.4
Gene ID: Rep_631_c_0_703
Type: TC
Location: 877552 - 878292 (-)
Gene ID: Rep_631_c_0_704
Type: CAZyme
Location: 879070 - 881256 (-)
Gene ID: Rep_631_c_0_705
Type: STP
Location: 881630 - 882817 (+)
Gene ID: Rep_631_c_0_706
Type: pfam
Location: 882930 - 884111 (-)
Gene ID: Rep_631_c_0_707
Type: TC
Location: 884134 - 885798 (-)
Gene ID: Rep_631_c_0_708
Type: pfam
Location: 885928 - 886623 (-)
Gene ID: Rep_631_c_0_709
Type: pfam
Location: 886613 - 886984 (-)
Gene ID: Rep_631_c_0_710
Type: TC
Location: 887278 - 889842 (-)
Gene ID: Rep_631_c_0_711
Type: TC
Location: 889903 - 891402 (-)
Gene ID: Rep_631_c_0_712
Type: TC
Location: 891399 - 894536 (-)
Gene ID: Rep_631_c_0_713
Type: TC
Location: 894541 - 895647 (-)

Taxonomic Lineage

Domain
Bacteria
→
Phylum
Bacteroidota
→
Class
Bacteroidia
→
Order
Bacteroidales
→
Family
Rikenellaceae
→
Genus
Alistipes
→
Species
Alistipes dispar

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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