Genome Details
Selected Rep_genome_ID: Rep_476
Total Genomes Found: 2
Total Genomes Found: 2
Read Mapping - JBrowse
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Bacteroides
Species
Bacteroides rodentium
Genomes Table
| Genome ID | Genome Length | Completeness | Contamination | Country | Continent | Source |
|---|---|---|---|---|---|---|
| CGMR020242 | 4,079,273 | 91.84% | 0.74% | China | Asia | CGMR |
| Rep_476 | 4,382,078 | 96.6791% | 0.789963% | NA | NA | WIS |
Analysis Charts
CGCs
| Gene Cluster ID | Family Name | In Labeled Family | Gene Count | CAZyme Count | Substrate |
|---|---|---|---|---|---|
| Rep_476_CGC68 | CGCFAM_01846 | Yes | 7 | 2 | |
| Rep_476_CGC23 | CGCFAM_02240 | Yes | 5 | 1 | |
| Rep_476_CGC54 | CGCFAM_02241 | Yes | 8 | 5 | |
| Rep_476_CGC15 | CGCFAM_02368 | Yes | 8 | 3 | |
| Rep_476_CGC46 | CGCFAM_02994 | Yes | 8 | 6 | |
| Rep_476_CGC7 | CGCFAM_02995 | Yes | 6 | 3 | |
| Rep_476_CGC45 | CGCFAM_02998 | Yes | 8 | 1 | |
| Rep_476_CGC35 | CGCFAM_03860 | Yes | 4 | 2 | |
| Rep_476_CGC9 | CGCFAM_05252 | Yes | 5 | 3 | |
| Rep_476_CGC60 | CGCFAM_05305 | Yes | 7 | 4 | |
| Rep_476_CGC32 | CGCFAM_05471 | Yes | 3 | 1 | |
| Rep_476_CGC19 | CGCFAM_06551 | Yes | 17 | 8 | |
| Rep_476_CGC62 | CGCFAM_11294 | Yes | 14 | 7 |
Top CAZyme Families