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Cluster: Rep_476_CGC54

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
TC Rep_476_c_186 Rep_476_c_186_10 10615 11259 + 3.A.1.12.5
NULL(UNKNOWN) Rep_476_c_186 Rep_476_c_186_11 11278 12486 + NULL(UNKNOWN)
[View Structural Homologs]
CAZyme Rep_476_c_186 Rep_476_c_186_12 12596 13810 - GH88
CAZyme Rep_476_c_186 Rep_476_c_186_13 13823 15457 - CBM91 | GH43_10
CAZyme Rep_476_c_186 Rep_476_c_186_14 15513 17462 - GH97
NULL(UNKNOWN) Rep_476_c_186 Rep_476_c_186_15 17525 19177 - NULL(UNKNOWN)
[View Structural Homologs]
CAZyme Rep_476_c_186 Rep_476_c_186_16 19190 21112 - GH146
CAZyme Rep_476_c_186 Rep_476_c_186_17 21301 22758 + GH28
Gene ID: Rep_476_c_186_10
Type: TC
Location: 10615 - 11259 (+)
Gene ID: Rep_476_c_186_11
Type:
Location: 11278 - 12486 (+)
Gene ID: Rep_476_c_186_12
Type: CAZyme
Location: 12596 - 13810 (-)
Gene ID: Rep_476_c_186_13
Type: CAZyme
Location: 13823 - 15457 (-)
Gene ID: Rep_476_c_186_14
Type: CAZyme
Location: 15513 - 17462 (-)
Gene ID: Rep_476_c_186_15
Type:
Location: 17525 - 19177 (-)
Gene ID: Rep_476_c_186_16
Type: CAZyme
Location: 19190 - 21112 (-)
Gene ID: Rep_476_c_186_17
Type: CAZyme
Location: 21301 - 22758 (+)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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