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Cluster: Rep_476_CGC45

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
CAZyme Rep_476_c_150 Rep_476_c_150_1 389 2593 - GH36
pfam Rep_476_c_150 Rep_476_c_150_2 2694 3458 - adh_short | KR | adh_short_C2
TC Rep_476_c_150 Rep_476_c_150_3 3672 5078 + 3.A.1.11.8
TC Rep_476_c_150 Rep_476_c_150_4 5068 5868 + 3.A.1.11.8
TC Rep_476_c_150 Rep_476_c_150_5 5865 6656 + 3.A.1.11.8
TC Rep_476_c_150 Rep_476_c_150_6 6665 8038 + 3.A.1.11.2
TC Rep_476_c_150 Rep_476_c_150_7 8071 9399 + 2.A.66.1.13
TC Rep_476_c_150 Rep_476_c_150_8 9499 10173 + 9.B.186.1.3
Gene ID: Rep_476_c_150_1
Type: CAZyme
Location: 389 - 2593 (-)
Gene ID: Rep_476_c_150_2
Type: pfam
Location: 2694 - 3458 (-)
Gene ID: Rep_476_c_150_3
Type: TC
Location: 3672 - 5078 (+)
Gene ID: Rep_476_c_150_4
Type: TC
Location: 5068 - 5868 (+)
Gene ID: Rep_476_c_150_5
Type: TC
Location: 5865 - 6656 (+)
Gene ID: Rep_476_c_150_6
Type: TC
Location: 6665 - 8038 (+)
Gene ID: Rep_476_c_150_7
Type: TC
Location: 8071 - 9399 (+)
Gene ID: Rep_476_c_150_8
Type: TC
Location: 9499 - 10173 (+)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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