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Cluster: Rep_476_CGC15

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
TC Rep_476_c_58 Rep_476_c_58_4 2826 4721 + 3.A.18.1.1
pfam Rep_476_c_58 Rep_476_c_58_5 5007 7661 + Kelch_3 | Kelch_4 | Kelch_KLHDC2_KLHL20_DRC7
pfam Rep_476_c_58 Rep_476_c_58_6 7719 9407 - GxGYxYP_C | GxGYxYP_N | GxGYxYP_N_2nd | GxGYxYP_N_3rd
CAZyme Rep_476_c_58 Rep_476_c_58_7 9497 10468 - CBM32
TC Rep_476_c_58 Rep_476_c_58_8 10500 12242 - 8.A.46.1.4
TC Rep_476_c_58 Rep_476_c_58_9 12271 15432 - 1.B.14.6.1
CAZyme Rep_476_c_58 Rep_476_c_58_10 16051 17505 + GH29
CAZyme Rep_476_c_58 Rep_476_c_58_11 17598 21185 + GH2
Gene ID: Rep_476_c_58_4
Type: TC
Location: 2826 - 4721 (+)
Gene ID: Rep_476_c_58_5
Type: pfam
Location: 5007 - 7661 (+)
Gene ID: Rep_476_c_58_6
Type: pfam
Location: 7719 - 9407 (-)
Gene ID: Rep_476_c_58_7
Type: CAZyme
Location: 9497 - 10468 (-)
Gene ID: Rep_476_c_58_8
Type: TC
Location: 10500 - 12242 (-)
Gene ID: Rep_476_c_58_9
Type: TC
Location: 12271 - 15432 (-)
Gene ID: Rep_476_c_58_10
Type: CAZyme
Location: 16051 - 17505 (+)
Gene ID: Rep_476_c_58_11
Type: CAZyme
Location: 17598 - 21185 (+)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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