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Cluster: Rep_476_CGC7

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
TC Rep_476_c_18 Rep_476_c_18_2 208 3321 + 1.B.14.6.1
TC Rep_476_c_18 Rep_476_c_18_3 3340 5085 + 8.A.46.1.3
pfam Rep_476_c_18 Rep_476_c_18_4 5102 5482 + TIG
CAZyme Rep_476_c_18 Rep_476_c_18_5 5501 6685 + GH26
CAZyme Rep_476_c_18 Rep_476_c_18_6 6698 10417 + GH2
CAZyme Rep_476_c_18 Rep_476_c_18_7 10462 11622 + GH5_26
Gene ID: Rep_476_c_18_2
Type: TC
Location: 208 - 3321 (+)
Gene ID: Rep_476_c_18_3
Type: TC
Location: 3340 - 5085 (+)
Gene ID: Rep_476_c_18_4
Type: pfam
Location: 5102 - 5482 (+)
Gene ID: Rep_476_c_18_5
Type: CAZyme
Location: 5501 - 6685 (+)
Gene ID: Rep_476_c_18_6
Type: CAZyme
Location: 6698 - 10417 (+)
Gene ID: Rep_476_c_18_7
Type: CAZyme
Location: 10462 - 11622 (+)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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