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Cluster: Rep_476_CGC46

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
CAZyme Rep_476_c_158 Rep_476_c_158_5 4455 5453 + GT2
CAZyme Rep_476_c_158 Rep_476_c_158_6 5466 6446 + GT2
CAZyme Rep_476_c_158 Rep_476_c_158_7 6520 7671 + GT4
CAZyme Rep_476_c_158 Rep_476_c_158_8 7692 8672 + GT2
CAZyme Rep_476_c_158 Rep_476_c_158_9 8674 9585 + GT11
CAZyme Rep_476_c_158 Rep_476_c_158_10 9662 10540 + GT2
pfam Rep_476_c_158 Rep_476_c_158_11 10545 11408 + DUF6492
TC Rep_476_c_158 Rep_476_c_158_12 11528 13366 + 3.A.1.106.2
Gene ID: Rep_476_c_158_5
Type: CAZyme
Location: 4455 - 5453 (+)
Gene ID: Rep_476_c_158_6
Type: CAZyme
Location: 5466 - 6446 (+)
Gene ID: Rep_476_c_158_7
Type: CAZyme
Location: 6520 - 7671 (+)
Gene ID: Rep_476_c_158_8
Type: CAZyme
Location: 7692 - 8672 (+)
Gene ID: Rep_476_c_158_9
Type: CAZyme
Location: 8674 - 9585 (+)
Gene ID: Rep_476_c_158_10
Type: CAZyme
Location: 9662 - 10540 (+)
Gene ID: Rep_476_c_158_11
Type: pfam
Location: 10545 - 11408 (+)
Gene ID: Rep_476_c_158_12
Type: TC
Location: 11528 - 13366 (+)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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