Genome Details
Selected Rep_genome_ID: Rep_3085
Total Genomes Found: 3
Total Genomes Found: 3
Read Mapping - JBrowse
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Oscillospirales
Family
Ruminococcaceae
Genus
Faecalibacterium
Species
Faecalibacterium prausnitzii_F
Genomes Table
| Genome ID | Genome Length | Completeness | Contamination | Country | Continent | Source |
|---|---|---|---|---|---|---|
| AG273_bin.70_sub | 2,285,952 | 97.11% | 1.12% | NA | Africa | H3AfricaPhase2 |
| Rep_3085 | 2,423,712 | 98.3503% | 0% | NA | NA | WIS |
| VatanenT_2016_SRR4408281_bin.10 | 2,543,909 | 98.63% | 0.566% | Estonia | Europe | ELGG |
Analysis Charts
CGCs
| Gene Cluster ID | Family Name | In Labeled Family | Gene Count | CAZyme Count | Substrate |
|---|---|---|---|---|---|
| Rep_3085_CGC12 | CGCFAM_00098 | Yes | 5 | 2 | |
| Rep_3085_CGC10 | CGCFAM_00137 | Yes | 4 | 1 | |
| Rep_3085_CGC23 | CGCFAM_00718 | Yes | 11 | 2 | |
| Rep_3085_CGC26 | CGCFAM_01009 | Yes | 13 | 1 | |
| Rep_3085_CGC27 | CGCFAM_01786 | Yes | 5 | 1 | |
| Rep_3085_CGC24 | CGCFAM_02429 | Yes | 5 | 2 | |
| Rep_3085_CGC5 | CGCFAM_03192 | Yes | 5 | 2 | |
| Rep_3085_CGC1 | CGCFAM_10176 | Yes | 8 | 2 |
Top CAZyme Families