Cluster: Rep_3085_CGC12
🧬 Cluster Details
- Gene Count: 5
- CAZyme Count: 2
- Substrate:
- Genome ID: Rep_3085
- CGC Family ID: CGCFAM_00098
- Continent: NA
- Source Study: Leviatan et al., 2022 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| CAZyme | Rep_3085_c_12 | Rep_3085_c_12_10 | 9735 | 11708 | + | GH133 |
| CAZyme | Rep_3085_c_12 | Rep_3085_c_12_11 | 11689 | 13512 | + | GH13_31 |
| STP | Rep_3085_c_12 | Rep_3085_c_12_12 | 13574 | 14857 | + | SBP_bac_1 |
| TC | Rep_3085_c_12 | Rep_3085_c_12_13 | 14888 | 16276 | + | 3.A.1.1.27 |
| TC | Rep_3085_c_12 | Rep_3085_c_12_14 | 16276 | 17151 | + | 3.A.1.1.27 |
Gene ID: Rep_3085_c_12_10
Type: CAZyme
Location: 9735 - 11708 (+)
Type: CAZyme
Location: 9735 - 11708 (+)
Gene ID: Rep_3085_c_12_11
Type: CAZyme
Location: 11689 - 13512 (+)
Type: CAZyme
Location: 11689 - 13512 (+)
Gene ID: Rep_3085_c_12_12
Type: STP
Location: 13574 - 14857 (+)
Type: STP
Location: 13574 - 14857 (+)
Gene ID: Rep_3085_c_12_13
Type: TC
Location: 14888 - 16276 (+)
Type: TC
Location: 14888 - 16276 (+)
Gene ID: Rep_3085_c_12_14
Type: TC
Location: 16276 - 17151 (+)
Type: TC
Location: 16276 - 17151 (+)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Oscillospirales
Family
Ruminococcaceae
Genus
Faecalibacterium
Species
Faecalibacterium prausnitzii_F
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
Loading chart...
No differentially abundant genes found in the 2019 study.