Cluster: Rep_3085_CGC27
🧬 Cluster Details
- Gene Count: 5
- CAZyme Count: 1
- Substrate:
- Genome ID: Rep_3085
- CGC Family ID: CGCFAM_01786
- Continent: NA
- Source Study: Leviatan et al., 2022 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | Rep_3085_c_36 | Rep_3085_c_36_10 | 8295 | 10127 | - | 3.A.25.2.1 |
| NULL(UNKNOWN) | Rep_3085_c_36 | Rep_3085_c_36_11 | 10462 | 11100 | + |
NULL(UNKNOWN)
[View Structural Homologs] |
| TC | Rep_3085_c_36 | Rep_3085_c_36_12 | 11272 | 11976 | + | 3.A.1.122.7 |
| TC | Rep_3085_c_36 | Rep_3085_c_36_13 | 11981 | 15244 | + | 3.A.1.137.2 |
| CAZyme | Rep_3085_c_36 | Rep_3085_c_36_14 | 15415 | 16152 | - | GT51 |
Gene ID: Rep_3085_c_36_10
Type: TC
Location: 8295 - 10127 (-)
Type: TC
Location: 8295 - 10127 (-)
Gene ID: Rep_3085_c_36_11
Type:
Location: 10462 - 11100 (+)
Type:
Location: 10462 - 11100 (+)
Gene ID: Rep_3085_c_36_12
Type: TC
Location: 11272 - 11976 (+)
Type: TC
Location: 11272 - 11976 (+)
Gene ID: Rep_3085_c_36_13
Type: TC
Location: 11981 - 15244 (+)
Type: TC
Location: 11981 - 15244 (+)
Gene ID: Rep_3085_c_36_14
Type: CAZyme
Location: 15415 - 16152 (-)
Type: CAZyme
Location: 15415 - 16152 (-)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Oscillospirales
Family
Ruminococcaceae
Genus
Faecalibacterium
Species
Faecalibacterium prausnitzii_F
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.