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Genome Details

Selected Rep_genome_ID: Rep_255
Total Genomes Found: 3
Read Mapping - JBrowse
Taxonomic Lineage
Domain
Bacteria
→
Phylum
Bacteroidota
→
Class
Bacteroidia
→
Order
Bacteroidales
→
Family
Bacteroidaceae
→
Genus
Prevotella
→
Species
Prevotella sp900315955
Genomes Table
Genome ID Genome Length Completeness Contamination Country Continent Source
HRGMv2_0481 3,521,009 97.19% 0.864% NA Europe HRGM
MGYG000001972 3,441,323 97.18% 1.69% Denmark Europe UHGG
Rep_255 3,338,862 97.4099% 0.695548% NA NA WIS
Analysis Charts
CGCs
Gene Cluster ID Family Name In Labeled Family Gene Count CAZyme Count Substrate
Rep_255_CGC12 CGCFAM_00001 Yes 6 3 pectin/galactan/beta-glucan/xylan/beta-mannan/host glycan
Rep_255_CGC22 CGCFAM_00001 Yes 3 1 pectin/galactan/beta-glucan/xylan/beta-mannan/host glycan
Rep_255_CGC24 CGCFAM_00001 Yes 4 1 pectin/galactan/beta-glucan/xylan/beta-mannan/host glycan
Rep_255_CGC32 CGCFAM_00001 Yes 3 1 pectin/galactan/beta-glucan/xylan/beta-mannan/host glycan
Rep_255_CGC46 CGCFAM_00001 Yes 8 3 pectin/galactan/beta-glucan/xylan/beta-mannan/host glycan
Rep_255_CGC27 CGCFAM_00016 Yes 7 3 host glycan
Rep_255_CGC19 CGCFAM_00081 Yes 4 1
Rep_255_CGC49 CGCFAM_00081 Yes 9 1
Rep_255_CGC50 CGCFAM_00082 Yes 4 3 beta-mannan
Rep_255_CGC18 CGCFAM_00108 Yes 8 3 pectin
Rep_255_CGC45 CGCFAM_00147 Yes 5 3
Rep_255_CGC11 CGCFAM_00197 Yes 7 1
Rep_255_CGC4 CGCFAM_00431 Yes 6 3
Rep_255_CGC2 CGCFAM_00440 Yes 7 3
Rep_255_CGC37 CGCFAM_00513 Yes 6 2
Rep_255_CGC30 CGCFAM_00644 Yes 3 1
Rep_255_CGC48 CGCFAM_02418 Yes 5 1
Rep_255_CGC6 CGCFAM_02956 Yes 4 1
Rep_255_CGC31 CGCFAM_03914 Yes 5 1
Rep_255_CGC41 CGCFAM_04434 Yes 3 1
Rep_255_CGC17 CGCFAM_06369 Yes 4 2
Rep_255_CGC39 CGCFAM_09132 Yes 4 1
Rep_255_CGC38 CGCFAM_11253 Yes 12 5
Top CAZyme Families