Cluster: Rep_255_CGC2
🧬 Cluster Details
- Gene Count: 7
- CAZyme Count: 3
- Substrate:
- Genome ID: Rep_255
- CGC Family ID: CGCFAM_00440
- Continent: NA
- Source Study: Leviatan et al., 2022 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | Rep_255_c_3 | Rep_255_c_3_32 | 40383 | 43409 | + | 1.B.14.6.1 |
| TC | Rep_255_c_3 | Rep_255_c_3_33 | 43454 | 44923 | + | 8.A.46.1.4 |
| CAZyme | Rep_255_c_3 | Rep_255_c_3_34 | 45108 | 47237 | + | CBM32 | GH43_28 |
| NULL(UNKNOWN) | Rep_255_c_3 | Rep_255_c_3_35 | 47234 | 47485 | + |
NULL(UNKNOWN)
[View Structural Homologs] |
| CAZyme | Rep_255_c_3 | Rep_255_c_3_36 | 47506 | 48888 | + | GH144 |
| CAZyme | Rep_255_c_3 | Rep_255_c_3_37 | 49085 | 51358 | + | GH3 |
| TC | Rep_255_c_3 | Rep_255_c_3_38 | 51388 | 53268 | - | 9.B.18.2.1 |
Gene ID: Rep_255_c_3_32
Type: TC
Location: 40383 - 43409 (+)
Type: TC
Location: 40383 - 43409 (+)
Gene ID: Rep_255_c_3_33
Type: TC
Location: 43454 - 44923 (+)
Type: TC
Location: 43454 - 44923 (+)
Gene ID: Rep_255_c_3_34
Type: CAZyme
Location: 45108 - 47237 (+)
Type: CAZyme
Location: 45108 - 47237 (+)
Gene ID: Rep_255_c_3_35
Type:
Location: 47234 - 47485 (+)
Type:
Location: 47234 - 47485 (+)
Gene ID: Rep_255_c_3_36
Type: CAZyme
Location: 47506 - 48888 (+)
Type: CAZyme
Location: 47506 - 48888 (+)
Gene ID: Rep_255_c_3_37
Type: CAZyme
Location: 49085 - 51358 (+)
Type: CAZyme
Location: 49085 - 51358 (+)
Gene ID: Rep_255_c_3_38
Type: TC
Location: 51388 - 53268 (-)
Type: TC
Location: 51388 - 53268 (-)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Prevotella
Species
Prevotella sp900315955
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
Loading chart...
No differentially abundant genes found in the 2019 study.