dbCAN Logo

Cluster: Rep_255_CGC18

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
TC Rep_255_c_92 Rep_255_c_92_10 15005 16738 - 2.A.21.3.19
sulfatase Rep_255_c_92 Rep_255_c_92_11 16790 17983 - S1_22
CAZyme Rep_255_c_92 Rep_255_c_92_12 18062 20473 - GH51_2
CAZyme Rep_255_c_92 Rep_255_c_92_13 20581 21573 - GH43_5
CAZyme Rep_255_c_92 Rep_255_c_92_14 21636 24308 - GH43_4
NULL(UNKNOWN) Rep_255_c_92 Rep_255_c_92_15 24390 26180 - NULL(UNKNOWN)
[View Structural Homologs]
pfam Rep_255_c_92 Rep_255_c_92_16 26243 28042 - SusD_RagB | SusD-like_3
TC Rep_255_c_92 Rep_255_c_92_17 28085 31303 - 1.B.14.6.1
Gene ID: Rep_255_c_92_10
Type: TC
Location: 15005 - 16738 (-)
Gene ID: Rep_255_c_92_11
Type: sulfatase
Location: 16790 - 17983 (-)
Gene ID: Rep_255_c_92_12
Type: CAZyme
Location: 18062 - 20473 (-)
Gene ID: Rep_255_c_92_13
Type: CAZyme
Location: 20581 - 21573 (-)
Gene ID: Rep_255_c_92_14
Type: CAZyme
Location: 21636 - 24308 (-)
Gene ID: Rep_255_c_92_15
Type:
Location: 24390 - 26180 (-)
Gene ID: Rep_255_c_92_16
Type: pfam
Location: 26243 - 28042 (-)
Gene ID: Rep_255_c_92_17
Type: TC
Location: 28085 - 31303 (-)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

Loading chart...

No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

← Back to Cluster List