Cluster: Rep_255_CGC24
🧬 Cluster Details
- Gene Count: 4
- CAZyme Count: 1
- Substrate: pectin/galactan/beta-glucan/xylan/beta-mannan/host glycan
- Genome ID: Rep_255
- CGC Family ID: CGCFAM_00001
- Continent: NA
- Source Study: Leviatan et al., 2022 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| CAZyme | Rep_255_c_120 | Rep_255_c_120_8 | 7352 | 8440 | + | GH18 |
| TC | Rep_255_c_120 | Rep_255_c_120_9 | 8667 | 11798 | + | 1.B.14.6.1 |
| pfam | Rep_255_c_120 | Rep_255_c_120_10 | 11810 | 13777 | + | SusD_RagB | SusD-like_3 |
| TC | Rep_255_c_120 | Rep_255_c_120_11 | 13829 | 16591 | + | 1.B.14.6.1 |
Gene ID: Rep_255_c_120_8
Type: CAZyme
Location: 7352 - 8440 (+)
Type: CAZyme
Location: 7352 - 8440 (+)
Gene ID: Rep_255_c_120_9
Type: TC
Location: 8667 - 11798 (+)
Type: TC
Location: 8667 - 11798 (+)
Gene ID: Rep_255_c_120_10
Type: pfam
Location: 11810 - 13777 (+)
Type: pfam
Location: 11810 - 13777 (+)
Gene ID: Rep_255_c_120_11
Type: TC
Location: 13829 - 16591 (+)
Type: TC
Location: 13829 - 16591 (+)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Prevotella
Species
Prevotella sp900315955
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
Loading chart...
No differentially abundant genes found in the 2019 study.