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Cluster: Rep_255_CGC49

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
TC Rep_255_c_245 Rep_255_c_245_1 29 1114 + 3.D.1.5.1
STP Rep_255_c_245 Rep_255_c_245_2 1152 1715 + Fer4 | Fer4
pfam Rep_255_c_245 Rep_255_c_245_3 1720 2241 + Oxidored_q3
TC Rep_255_c_245 Rep_255_c_245_4 2238 2546 + 3.D.1.2.1
TC Rep_255_c_245 Rep_255_c_245_5 2633 4597 + 3.D.9.1.1
TC Rep_255_c_245 Rep_255_c_245_6 4621 6126 + 3.D.1.5.1
TC Rep_255_c_245 Rep_255_c_245_7 6278 7819 + 3.D.1.2.1
NULL(UNKNOWN) Rep_255_c_245 Rep_255_c_245_8 8146 8328 + NULL(UNKNOWN)
[View Structural Homologs]
CAZyme Rep_255_c_245 Rep_255_c_245_9 8485 9411 + GH73
Gene ID: Rep_255_c_245_1
Type: TC
Location: 29 - 1114 (+)
Gene ID: Rep_255_c_245_2
Type: STP
Location: 1152 - 1715 (+)
Gene ID: Rep_255_c_245_3
Type: pfam
Location: 1720 - 2241 (+)
Gene ID: Rep_255_c_245_4
Type: TC
Location: 2238 - 2546 (+)
Gene ID: Rep_255_c_245_5
Type: TC
Location: 2633 - 4597 (+)
Gene ID: Rep_255_c_245_6
Type: TC
Location: 4621 - 6126 (+)
Gene ID: Rep_255_c_245_7
Type: TC
Location: 6278 - 7819 (+)
Gene ID: Rep_255_c_245_8
Type:
Location: 8146 - 8328 (+)
Gene ID: Rep_255_c_245_9
Type: CAZyme
Location: 8485 - 9411 (+)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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