Genome Details
Selected Rep_genome_ID: Rep_247
Total Genomes Found: 1
Total Genomes Found: 1
Read Mapping - JBrowse
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Prevotella
Species
Prevotella mizrahii
Genomes Table
| Genome ID | Genome Length | Completeness | Contamination | Country | Continent | Source |
|---|---|---|---|---|---|---|
| Rep_247 | 3,435,079 | 98.6487% | 0.506757% | NA | NA | WIS |
Analysis Charts
CGCs
| Gene Cluster ID | Family Name | In Labeled Family | Gene Count | CAZyme Count | Substrate |
|---|---|---|---|---|---|
| Rep_247_CGC22 | CGCFAM_00001 | Yes | 4 | 1 | pectin/galactan/beta-glucan/xylan/beta-mannan/host glycan |
| Rep_247_CGC8 | CGCFAM_00003 | Yes | 7 | 2 | |
| Rep_247_CGC41 | CGCFAM_00017 | Yes | 5 | 2 | fructan |
| Rep_247_CGC37 | CGCFAM_00044 | Yes | 4 | 1 | beta-mannan/xylan/beta-glucan |
| Rep_247_CGC38 | CGCFAM_00116 | Yes | 12 | 3 | xylan/beta-glucan |
| Rep_247_CGC5 | CGCFAM_01143 | Yes | 17 | 6 | |
| Rep_247_CGC45 | CGCFAM_01520 | Yes | 3 | 1 | |
| Rep_247_CGC9 | CGCFAM_01845 | Yes | 10 | 4 | |
| Rep_247_CGC2 | CGCFAM_02472 | Yes | 7 | 4 | |
| Rep_247_CGC20 | CGCFAM_03186 | Yes | 5 | 2 | |
| Rep_247_CGC39 | CGCFAM_03980 | Yes | 20 | 2 | |
| Rep_247_CGC24 | CGCFAM_04593 | Yes | 4 | 1 | |
| Rep_247_CGC40 | CGCFAM_05817 | Yes | 9 | 4 | |
| Rep_247_CGC12 | CGCFAM_06427 | Yes | 4 | 1 | |
| Rep_247_CGC49 | CGCFAM_11025 | Yes | 5 | 1 |
Top CAZyme Families