Cluster: Rep_247_CGC20
🧬 Cluster Details
- Gene Count: 5
- CAZyme Count: 2
- Substrate:
- Genome ID: Rep_247
- CGC Family ID: CGCFAM_03186
- Continent: NA
- Source Study: Leviatan et al., 2022 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | Rep_247_c_14 | Rep_247_c_14_13 | 11421 | 13007 | + | 3.A.2.1.3 |
| TC | Rep_247_c_14 | Rep_247_c_14_14 | 13089 | 13991 | + | 3.A.2.1.5 |
| NULL(UNKNOWN) | Rep_247_c_14 | Rep_247_c_14_15 | 14082 | 14516 | - |
NULL(UNKNOWN)
[View Structural Homologs] |
| CAZyme | Rep_247_c_14 | Rep_247_c_14_16 | 14656 | 16317 | + | GT3 |
| CAZyme | Rep_247_c_14 | Rep_247_c_14_17 | 16466 | 19027 | + | GT35 |
Gene ID: Rep_247_c_14_13
Type: TC
Location: 11421 - 13007 (+)
Type: TC
Location: 11421 - 13007 (+)
Gene ID: Rep_247_c_14_14
Type: TC
Location: 13089 - 13991 (+)
Type: TC
Location: 13089 - 13991 (+)
Gene ID: Rep_247_c_14_15
Type:
Location: 14082 - 14516 (-)
Type:
Location: 14082 - 14516 (-)
Gene ID: Rep_247_c_14_16
Type: CAZyme
Location: 14656 - 16317 (+)
Type: CAZyme
Location: 14656 - 16317 (+)
Gene ID: Rep_247_c_14_17
Type: CAZyme
Location: 16466 - 19027 (+)
Type: CAZyme
Location: 16466 - 19027 (+)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Prevotella
Species
Prevotella mizrahii
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.