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Cluster: Rep_247_CGC2

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
TC Rep_247_c_0 Rep_247_c_0_21 24993 26219 - 9.B.156.3.1
TC Rep_247_c_0 Rep_247_c_0_22 26296 27825 + 9.B.18.1.1
CAZyme Rep_247_c_0 Rep_247_c_0_23 27949 29406 - CE20
CAZyme Rep_247_c_0 Rep_247_c_0_24 30088 31371 + CE7
CAZyme Rep_247_c_0 Rep_247_c_0_25 31474 32529 + GH26
CAZyme Rep_247_c_0 Rep_247_c_0_26 32640 33809 + GH130_1
TC Rep_247_c_0 Rep_247_c_0_27 33881 35230 + 2.A.2.3.4
Gene ID: Rep_247_c_0_21
Type: TC
Location: 24993 - 26219 (-)
Gene ID: Rep_247_c_0_22
Type: TC
Location: 26296 - 27825 (+)
Gene ID: Rep_247_c_0_23
Type: CAZyme
Location: 27949 - 29406 (-)
Gene ID: Rep_247_c_0_24
Type: CAZyme
Location: 30088 - 31371 (+)
Gene ID: Rep_247_c_0_25
Type: CAZyme
Location: 31474 - 32529 (+)
Gene ID: Rep_247_c_0_26
Type: CAZyme
Location: 32640 - 33809 (+)
Gene ID: Rep_247_c_0_27
Type: TC
Location: 33881 - 35230 (+)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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