Genome Details
Selected Rep_genome_ID: Rep_2368
Total Genomes Found: 23
Total Genomes Found: 23
Read Mapping - JBrowse
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Lachnospirales
Family
Lachnospiraceae
Genus
Lachnospira
Species
Lachnospira eligens_A
Genomes Table
| Genome ID | Genome Length | Completeness | Contamination | Country | Continent | Source |
|---|---|---|---|---|---|---|
| A165.CMAG_5 | 2,513,652 | 95.3% | 0% | China(Inner Mongolia) | Asia | IMGG |
| AG105_8 | 2,881,305 | 97.99% | 0% | NA | Africa | H3AfricaPhase2 |
| CGMR021414 | 2,318,678 | 95.74% | 0.5% | China | Asia | CGMR |
| CGMR059957 | 2,736,528 | 98.66% | 0% | China | Asia | CGMR |
| GCA_021632025.1_ASM2163202v1_genomic | 2,537,241 | 94.63% | 0.45% | NA | Africa | H3AfricaPhase1 |
| GCA_021636825.1_ASM2163682v1_genomic | 2,385,913 | 95.97% | 0% | NA | Africa | H3AfricaPhase1 |
| Rep_2368 | 3,120,450 | 98.6577% | 0.0419463% | NA | NA | WIS |
| SPMP102_bin.100 | 2,636,758 | 97.07% | 1.68% | Singapore | Asia | SPMP |
| SPMP11_bin.89 | 2,789,227 | 96.2% | 0.67% | Singapore | Asia | SPMP |
| SPMP13_bin.4 | 2,814,331 | 95.81% | 0% | Singapore | Asia | SPMP |
| SPMP27_bin.30 | 2,751,345 | 95.97% | 0% | Singapore | Asia | SPMP |
| SPMP28_bin.143 | 2,766,570 | 97.32% | 0.67% | Singapore | Asia | SPMP |
| SPMP36_bin.59 | 2,775,274 | 93.96% | 1.34% | Singapore | Asia | SPMP |
| SPMP40_bin.112 | 2,698,165 | 96.42% | 0.34% | Singapore | Asia | SPMP |
| SPMP43_bin.43 | 2,667,024 | 95.03% | 0.67% | Singapore | Asia | SPMP |
| SPMP59_bin.28 | 2,676,264 | 95.37% | 0.67% | Singapore | Asia | SPMP |
| SPMP81_bin.21 | 2,554,508 | 97.99% | 0% | Singapore | Asia | SPMP |
| SPMP84_bin.12 | 2,793,490 | 96.64% | 2.01% | Singapore | Asia | SPMP |
| SPMP88_bin.61 | 2,713,903 | 97.99% | 0.67% | Singapore | Asia | SPMP |
| SPMP90_bin.39 | 2,647,492 | 95.64% | 0% | Singapore | Asia | SPMP |
| SPMP93_bin.55 | 2,646,967 | 96.25% | 0% | Singapore | Asia | SPMP |
| SPMP99_bin.37 | 2,833,496 | 98.66% | 0% | Singapore | Asia | SPMP |
| SW024_52 | 2,876,264 | 98.66% | 0% | NA | Africa | H3AfricaPhase2 |
Analysis Charts
CGCs
| Gene Cluster ID | Family Name | In Labeled Family | Gene Count | CAZyme Count | Substrate |
|---|---|---|---|---|---|
| Rep_2368_CGC31 | CGCFAM_00307 | Yes | 10 | 1 | |
| Rep_2368_CGC32 | CGCFAM_00905 | Yes | 12 | 2 | |
| Rep_2368_CGC25 | CGCFAM_01447 | Yes | 6 | 1 | |
| Rep_2368_CGC15 | CGCFAM_01465 | Yes | 7 | 2 | |
| Rep_2368_CGC11 | CGCFAM_02166 | Yes | 10 | 5 | |
| Rep_2368_CGC23 | CGCFAM_03727 | Yes | 4 | 3 | |
| Rep_2368_CGC24 | CGCFAM_06088 | Yes | 6 | 1 | |
| Rep_2368_CGC29 | CGCFAM_06367 | Yes | 11 | 2 | |
| Rep_2368_CGC3 | CGCFAM_09938 | Yes | 11 | 1 | |
| Rep_2368_CGC22 | CGCFAM_09939 | Yes | 5 | 2 |
Top CAZyme Families