Cluster: Rep_2368_CGC15
🧬 Cluster Details
- Gene Count: 7
- CAZyme Count: 2
- Substrate:
- Genome ID: Rep_2368
- CGC Family ID: CGCFAM_01465
- Continent: NA
- Source Study: Leviatan et al., 2022 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | Rep_2368_c_7 | Rep_2368_c_7_1119 | 1212444 | 1213169 | - | 3.A.1.16.1 |
| pfam | Rep_2368_c_7 | Rep_2368_c_7_1120 | 1213295 | 1214281 | + | DHH |
| CAZyme | Rep_2368_c_7 | Rep_2368_c_7_1121 | 1214349 | 1215518 | - | GH25 |
| peptidase | Rep_2368_c_7 | Rep_2368_c_7_1122 | 1216339 | 1216989 | + | S14.UPW |
| pfam | Rep_2368_c_7 | Rep_2368_c_7_1123 | 1216999 | 1217916 | + | Fer4_12 |
| TC | Rep_2368_c_7 | Rep_2368_c_7_1124 | 1217967 | 1219394 | + | 2.A.2.1.1 |
| CAZyme | Rep_2368_c_7 | Rep_2368_c_7_1125 | 1219408 | 1221255 | + | GH13_11 |
Gene ID: Rep_2368_c_7_1119
Type: TC
Location: 1212444 - 1213169 (-)
Type: TC
Location: 1212444 - 1213169 (-)
Gene ID: Rep_2368_c_7_1120
Type: pfam
Location: 1213295 - 1214281 (+)
Type: pfam
Location: 1213295 - 1214281 (+)
Gene ID: Rep_2368_c_7_1121
Type: CAZyme
Location: 1214349 - 1215518 (-)
Type: CAZyme
Location: 1214349 - 1215518 (-)
Gene ID: Rep_2368_c_7_1122
Type: peptidase
Location: 1216339 - 1216989 (+)
Type: peptidase
Location: 1216339 - 1216989 (+)
Gene ID: Rep_2368_c_7_1123
Type: pfam
Location: 1216999 - 1217916 (+)
Type: pfam
Location: 1216999 - 1217916 (+)
Gene ID: Rep_2368_c_7_1124
Type: TC
Location: 1217967 - 1219394 (+)
Type: TC
Location: 1217967 - 1219394 (+)
Gene ID: Rep_2368_c_7_1125
Type: CAZyme
Location: 1219408 - 1221255 (+)
Type: CAZyme
Location: 1219408 - 1221255 (+)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Lachnospirales
Family
Lachnospiraceae
Genus
Lachnospira
Species
Lachnospira eligens_A
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.