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Cluster: Rep_2368_CGC11

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
CAZyme Rep_2368_c_7 Rep_2368_c_7_478 534183 535340 + GT4
CAZyme Rep_2368_c_7 Rep_2368_c_7_479 535356 536648 + GT4
NULL(UNKNOWN) Rep_2368_c_7 Rep_2368_c_7_480 536721 537806 + NULL(UNKNOWN)
[View Structural Homologs]
pfam Rep_2368_c_7 Rep_2368_c_7_481 537808 539406 + MBOAT
TC Rep_2368_c_7 Rep_2368_c_7_482 539431 540222 + 3.A.1.103.4
TC Rep_2368_c_7 Rep_2368_c_7_483 540245 541513 + 3.A.1.103.4
CAZyme Rep_2368_c_7 Rep_2368_c_7_484 541530 544028 + GT2 | GT2
CAZyme Rep_2368_c_7 Rep_2368_c_7_485 544044 546038 + GT2
pfam Rep_2368_c_7 Rep_2368_c_7_486 546067 547137 + NTP_transferase | NTP_transf_3 | ManC_GMP_beta-helix
CAZyme Rep_2368_c_7 Rep_2368_c_7_487 547190 548002 + GT2
Gene ID: Rep_2368_c_7_478
Type: CAZyme
Location: 534183 - 535340 (+)
Gene ID: Rep_2368_c_7_479
Type: CAZyme
Location: 535356 - 536648 (+)
Gene ID: Rep_2368_c_7_480
Type:
Location: 536721 - 537806 (+)
Gene ID: Rep_2368_c_7_481
Type: pfam
Location: 537808 - 539406 (+)
Gene ID: Rep_2368_c_7_482
Type: TC
Location: 539431 - 540222 (+)
Gene ID: Rep_2368_c_7_483
Type: TC
Location: 540245 - 541513 (+)
Gene ID: Rep_2368_c_7_484
Type: CAZyme
Location: 541530 - 544028 (+)
Gene ID: Rep_2368_c_7_485
Type: CAZyme
Location: 544044 - 546038 (+)
Gene ID: Rep_2368_c_7_486
Type: pfam
Location: 546067 - 547137 (+)
Gene ID: Rep_2368_c_7_487
Type: CAZyme
Location: 547190 - 548002 (+)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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