Cluster: Rep_2368_CGC32
🧬 Cluster Details
- Gene Count: 12
- CAZyme Count: 2
- Substrate:
- Genome ID: Rep_2368
- CGC Family ID: CGCFAM_00905
- Continent: NA
- Source Study: Leviatan et al., 2022 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | Rep_2368_c_10 | Rep_2368_c_10_54 | 59817 | 60308 | + | 9.A.11.1.1 |
| pfam | Rep_2368_c_10 | Rep_2368_c_10_55 | 60384 | 61172 | + | Ubie_methyltran | TehB | Methyltransf_11 | Methyltransf_12 | Methyltransf_23 | Methyltransf_25 | Methyltransf_31 |
| TC | Rep_2368_c_10 | Rep_2368_c_10_56 | 61248 | 62261 | + | 9.A.11.1.1 |
| pfam | Rep_2368_c_10 | Rep_2368_c_10_57 | 62266 | 62625 | + | SpoVAC_SpoVAEB |
| CAZyme | Rep_2368_c_10 | Rep_2368_c_10_58 | 62677 | 65364 | - | GT51 |
| pfam | Rep_2368_c_10 | Rep_2368_c_10_59 | 65475 | 66113 | + | UPF0029 | DUF1949 |
| NULL(UNKNOWN) | Rep_2368_c_10 | Rep_2368_c_10_60 | 66506 | 68146 | + |
NULL(UNKNOWN)
[View Structural Homologs] |
| TC | Rep_2368_c_10 | Rep_2368_c_10_61 | 68294 | 69790 | + | 3.A.1.1.29 |
| TC | Rep_2368_c_10 | Rep_2368_c_10_62 | 69804 | 70670 | + | 3.A.1.1.29 |
| NULL(UNKNOWN) | Rep_2368_c_10 | Rep_2368_c_10_63 | 70834 | 71724 | + |
NULL(UNKNOWN)
[View Structural Homologs] |
| CAZyme | Rep_2368_c_10 | Rep_2368_c_10_64 | 71715 | 73271 | + | GH28 |
| TC | Rep_2368_c_10 | Rep_2368_c_10_65 | 73302 | 75092 | + | 3.A.1.106.2 |
Gene ID: Rep_2368_c_10_54
Type: TC
Location: 59817 - 60308 (+)
Type: TC
Location: 59817 - 60308 (+)
Gene ID: Rep_2368_c_10_55
Type: pfam
Location: 60384 - 61172 (+)
Type: pfam
Location: 60384 - 61172 (+)
Gene ID: Rep_2368_c_10_56
Type: TC
Location: 61248 - 62261 (+)
Type: TC
Location: 61248 - 62261 (+)
Gene ID: Rep_2368_c_10_57
Type: pfam
Location: 62266 - 62625 (+)
Type: pfam
Location: 62266 - 62625 (+)
Gene ID: Rep_2368_c_10_58
Type: CAZyme
Location: 62677 - 65364 (-)
Type: CAZyme
Location: 62677 - 65364 (-)
Gene ID: Rep_2368_c_10_59
Type: pfam
Location: 65475 - 66113 (+)
Type: pfam
Location: 65475 - 66113 (+)
Gene ID: Rep_2368_c_10_60
Type:
Location: 66506 - 68146 (+)
Type:
Location: 66506 - 68146 (+)
Gene ID: Rep_2368_c_10_61
Type: TC
Location: 68294 - 69790 (+)
Type: TC
Location: 68294 - 69790 (+)
Gene ID: Rep_2368_c_10_62
Type: TC
Location: 69804 - 70670 (+)
Type: TC
Location: 69804 - 70670 (+)
Gene ID: Rep_2368_c_10_63
Type:
Location: 70834 - 71724 (+)
Type:
Location: 70834 - 71724 (+)
Gene ID: Rep_2368_c_10_64
Type: CAZyme
Location: 71715 - 73271 (+)
Type: CAZyme
Location: 71715 - 73271 (+)
Gene ID: Rep_2368_c_10_65
Type: TC
Location: 73302 - 75092 (+)
Type: TC
Location: 73302 - 75092 (+)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Lachnospirales
Family
Lachnospiraceae
Genus
Lachnospira
Species
Lachnospira eligens_A
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
Loading chart...
No differentially abundant genes found in the 2019 study.