Cluster: Rep_2368_CGC24
🧬 Cluster Details
- Gene Count: 6
- CAZyme Count: 1
- Substrate:
- Genome ID: Rep_2368
- CGC Family ID: CGCFAM_06088
- Continent: NA
- Source Study: Leviatan et al., 2022 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| CAZyme | Rep_2368_c_7 | Rep_2368_c_7_1973 | 2123778 | 2125601 | - | GT8 | GT8 |
| TC | Rep_2368_c_7 | Rep_2368_c_7_1974 | 2125726 | 2127873 | + | 9.B.74.1.1 |
| NULL(UNKNOWN) | Rep_2368_c_7 | Rep_2368_c_7_1975 | 2127889 | 2128239 | + |
NULL(UNKNOWN)
[View Structural Homologs] |
| TC | Rep_2368_c_7 | Rep_2368_c_7_1976 | 2128236 | 2129981 | + | 9.B.74.1.3 |
| TC | Rep_2368_c_7 | Rep_2368_c_7_1977 | 2130277 | 2131920 | - | 3.A.1.112.9 |
| TC | Rep_2368_c_7 | Rep_2368_c_7_1978 | 2131948 | 2133684 | - | 3.A.1.106.2 |
Gene ID: Rep_2368_c_7_1973
Type: CAZyme
Location: 2123778 - 2125601 (-)
Type: CAZyme
Location: 2123778 - 2125601 (-)
Gene ID: Rep_2368_c_7_1974
Type: TC
Location: 2125726 - 2127873 (+)
Type: TC
Location: 2125726 - 2127873 (+)
Gene ID: Rep_2368_c_7_1975
Type:
Location: 2127889 - 2128239 (+)
Type:
Location: 2127889 - 2128239 (+)
Gene ID: Rep_2368_c_7_1976
Type: TC
Location: 2128236 - 2129981 (+)
Type: TC
Location: 2128236 - 2129981 (+)
Gene ID: Rep_2368_c_7_1977
Type: TC
Location: 2130277 - 2131920 (-)
Type: TC
Location: 2130277 - 2131920 (-)
Gene ID: Rep_2368_c_7_1978
Type: TC
Location: 2131948 - 2133684 (-)
Type: TC
Location: 2131948 - 2133684 (-)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Lachnospirales
Family
Lachnospiraceae
Genus
Lachnospira
Species
Lachnospira eligens_A
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.