Cluster: Rep_2368_CGC22
🧬 Cluster Details
- Gene Count: 5
- CAZyme Count: 2
- Substrate:
- Genome ID: Rep_2368
- CGC Family ID: CGCFAM_09939
- Continent: NA
- Source Study: Leviatan et al., 2022 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | Rep_2368_c_7 | Rep_2368_c_7_1715 | 1834695 | 1836761 | - | 3.A.7.7.1 |
| STP | Rep_2368_c_7 | Rep_2368_c_7_1716 | 1836745 | 1837332 | - | HD |
| pfam | Rep_2368_c_7 | Rep_2368_c_7_1717 | 1837456 | 1838553 | - | Semialdhyde_dh | Semialdhyde_dhC |
| CAZyme | Rep_2368_c_7 | Rep_2368_c_7_1718 | 1838796 | 1840571 | - | CE12 |
| CAZyme | Rep_2368_c_7 | Rep_2368_c_7_1719 | 1840712 | 1844572 | - | PL1 | PL9_1 |
Gene ID: Rep_2368_c_7_1715
Type: TC
Location: 1834695 - 1836761 (-)
Type: TC
Location: 1834695 - 1836761 (-)
Gene ID: Rep_2368_c_7_1716
Type: STP
Location: 1836745 - 1837332 (-)
Type: STP
Location: 1836745 - 1837332 (-)
Gene ID: Rep_2368_c_7_1717
Type: pfam
Location: 1837456 - 1838553 (-)
Type: pfam
Location: 1837456 - 1838553 (-)
Gene ID: Rep_2368_c_7_1718
Type: CAZyme
Location: 1838796 - 1840571 (-)
Type: CAZyme
Location: 1838796 - 1840571 (-)
Gene ID: Rep_2368_c_7_1719
Type: CAZyme
Location: 1840712 - 1844572 (-)
Type: CAZyme
Location: 1840712 - 1844572 (-)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Lachnospirales
Family
Lachnospiraceae
Genus
Lachnospira
Species
Lachnospira eligens_A
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.