Genome Details
Selected Rep_genome_ID: Rep_2156
Total Genomes Found: 5
Total Genomes Found: 5
Read Mapping - JBrowse
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Lachnospirales
Family
Lachnospiraceae
Genus
Coprococcus
Species
Coprococcus sp900548215
Genomes Table
| Genome ID | Genome Length | Completeness | Contamination | Country | Continent | Source |
|---|---|---|---|---|---|---|
| CGMR083947 | 2,783,156 | 97.99% | 0% | China | Asia | CGMR |
| DM171_30 | 3,007,344 | 99.33% | 0% | NA | Africa | H3AfricaPhase2 |
| HRGMv2_2116 | 3,008,446 | 99.32% | 0% | Malaysia | Asia | HRGM |
| MGYG000001745 | 2,913,085 | 99.33% | 0% | Sweden | Europe | UHGG |
| Rep_2156 | 3,145,766 | 99.3289% | 0% | NA | NA | WIS |
Analysis Charts
CGCs
| Gene Cluster ID | Family Name | In Labeled Family | Gene Count | CAZyme Count | Substrate |
|---|---|---|---|---|---|
| Rep_2156_CGC34 | CGCFAM_00075 | Yes | 6 | 2 | |
| Rep_2156_CGC27 | CGCFAM_00414 | Yes | 8 | 2 | |
| Rep_2156_CGC28 | CGCFAM_00911 | Yes | 8 | 1 | |
| Rep_2156_CGC30 | CGCFAM_01344 | Yes | 4 | 1 | |
| Rep_2156_CGC19 | CGCFAM_02141 | Yes | 10 | 1 | |
| Rep_2156_CGC25 | CGCFAM_02224 | Yes | 4 | 1 | |
| PUL0636_Rep_2156_C5 | CGCFAM_02921 | Yes | 8 | 1 | fructan |
| Rep_2156_CGC17 | CGCFAM_03149 | Yes | 3 | 1 | |
| Rep_2156_CGC1 | CGCFAM_03955 | Yes | 3 | 1 | |
| Rep_2156_CGC2 | CGCFAM_10206 | Yes | 8 | 1 |
Top CAZyme Families