Cluster: Rep_2156_CGC1
🧬 Cluster Details
- Gene Count: 3
- CAZyme Count: 1
- Substrate:
- Genome ID: Rep_2156
- CGC Family ID: CGCFAM_03955
- Continent: NA
- Source Study: Leviatan et al., 2022 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | Rep_2156_c_1 | Rep_2156_c_1_10 | 13180 | 13953 | - | 3.A.1.134.12 |
| NULL(UNKNOWN) | Rep_2156_c_1 | Rep_2156_c_1_11 | 14237 | 15556 | - |
NULL(UNKNOWN)
[View Structural Homologs] |
| CAZyme | Rep_2156_c_1 | Rep_2156_c_1_12 | 15785 | 17533 | + | GH13_20 |
Gene ID: Rep_2156_c_1_10
Type: TC
Location: 13180 - 13953 (-)
Type: TC
Location: 13180 - 13953 (-)
Gene ID: Rep_2156_c_1_11
Type:
Location: 14237 - 15556 (-)
Type:
Location: 14237 - 15556 (-)
Gene ID: Rep_2156_c_1_12
Type: CAZyme
Location: 15785 - 17533 (+)
Type: CAZyme
Location: 15785 - 17533 (+)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Lachnospirales
Family
Lachnospiraceae
Genus
Coprococcus
Species
Coprococcus sp900548215
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.