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Cluster: Rep_2156_CGC27

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
CAZyme Rep_2156_c_11 Rep_2156_c_11_260 300575 302116 + GH77
CAZyme Rep_2156_c_11 Rep_2156_c_11_261 302234 304483 + GT35
TF Rep_2156_c_11 Rep_2156_c_11_262 304829 306346 + HTH_AraC
TC Rep_2156_c_11 Rep_2156_c_11_263 306403 308112 + 8.A.59.2.1
STP Rep_2156_c_11 Rep_2156_c_11_264 308429 309733 + SBP_bac_1
TC Rep_2156_c_11 Rep_2156_c_11_265 309840 311234 + 3.A.1.1.27
TC Rep_2156_c_11 Rep_2156_c_11_266 311234 312109 + 3.A.1.1.27
TC Rep_2156_c_11 Rep_2156_c_11_267 312160 313857 + 3.A.1.1.9
Gene ID: Rep_2156_c_11_260
Type: CAZyme
Location: 300575 - 302116 (+)
Gene ID: Rep_2156_c_11_261
Type: CAZyme
Location: 302234 - 304483 (+)
Gene ID: Rep_2156_c_11_262
Type: TF
Location: 304829 - 306346 (+)
Gene ID: Rep_2156_c_11_263
Type: TC
Location: 306403 - 308112 (+)
Gene ID: Rep_2156_c_11_264
Type: STP
Location: 308429 - 309733 (+)
Gene ID: Rep_2156_c_11_265
Type: TC
Location: 309840 - 311234 (+)
Gene ID: Rep_2156_c_11_266
Type: TC
Location: 311234 - 312109 (+)
Gene ID: Rep_2156_c_11_267
Type: TC
Location: 312160 - 313857 (+)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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