Cluster: Rep_2156_CGC25
🧬 Cluster Details
- Gene Count: 4
- CAZyme Count: 1
- Substrate:
- Genome ID: Rep_2156
- CGC Family ID: CGCFAM_02224
- Continent: NA
- Source Study: Leviatan et al., 2022 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | Rep_2156_c_11 | Rep_2156_c_11_113 | 138344 | 139105 | + | 3.A.1.134.12 |
| pfam | Rep_2156_c_11 | Rep_2156_c_11_114 | 139117 | 141573 | + | FtsX | FtsX |
| pfam | Rep_2156_c_11 | Rep_2156_c_11_115 | 141724 | 142302 | + | DUF1294 |
| CAZyme | Rep_2156_c_11 | Rep_2156_c_11_116 | 142563 | 143963 | + | GT2 |
Gene ID: Rep_2156_c_11_113
Type: TC
Location: 138344 - 139105 (+)
Type: TC
Location: 138344 - 139105 (+)
Gene ID: Rep_2156_c_11_114
Type: pfam
Location: 139117 - 141573 (+)
Type: pfam
Location: 139117 - 141573 (+)
Gene ID: Rep_2156_c_11_115
Type: pfam
Location: 141724 - 142302 (+)
Type: pfam
Location: 141724 - 142302 (+)
Gene ID: Rep_2156_c_11_116
Type: CAZyme
Location: 142563 - 143963 (+)
Type: CAZyme
Location: 142563 - 143963 (+)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Lachnospirales
Family
Lachnospiraceae
Genus
Coprococcus
Species
Coprococcus sp900548215
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.