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Cluster: Rep_2156_CGC28

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
TC Rep_2156_c_12 Rep_2156_c_12_103 107001 108704 - 8.A.7.1.1
STP Rep_2156_c_12 Rep_2156_c_12_104 108840 109103 - PTS-HPr
TC Rep_2156_c_12 Rep_2156_c_12_105 109445 111511 - 4.A.2.1.20
STP Rep_2156_c_12 Rep_2156_c_12_106 111615 112517 - PfkB
TF Rep_2156_c_12 Rep_2156_c_12_107 112517 113266 - HTH_DeoR
TC Rep_2156_c_12 Rep_2156_c_12_108 113709 114638 - 2.A.4.7.9
NULL(UNKNOWN) Rep_2156_c_12 Rep_2156_c_12_109 115068 115301 - NULL(UNKNOWN)
[View Structural Homologs]
CAZyme Rep_2156_c_12 Rep_2156_c_12_110 115379 117838 - GH3
Gene ID: Rep_2156_c_12_103
Type: TC
Location: 107001 - 108704 (-)
Gene ID: Rep_2156_c_12_104
Type: STP
Location: 108840 - 109103 (-)
Gene ID: Rep_2156_c_12_105
Type: TC
Location: 109445 - 111511 (-)
Gene ID: Rep_2156_c_12_106
Type: STP
Location: 111615 - 112517 (-)
Gene ID: Rep_2156_c_12_107
Type: TF
Location: 112517 - 113266 (-)
Gene ID: Rep_2156_c_12_108
Type: TC
Location: 113709 - 114638 (-)
Gene ID: Rep_2156_c_12_109
Type:
Location: 115068 - 115301 (-)
Gene ID: Rep_2156_c_12_110
Type: CAZyme
Location: 115379 - 117838 (-)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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