dbCAN Logo

Cluster: Rep_2156_CGC19

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
TC Rep_2156_c_10 Rep_2156_c_10_256 293816 294676 - 3.A.1.1.26
TC Rep_2156_c_10 Rep_2156_c_10_257 294686 295630 - 3.A.1.1.4
NULL(UNKNOWN) Rep_2156_c_10 Rep_2156_c_10_258 295746 297197 - NULL(UNKNOWN)
[View Structural Homologs]
NULL(UNKNOWN) Rep_2156_c_10 Rep_2156_c_10_259 297776 298771 + NULL(UNKNOWN)
[View Structural Homologs]
TC Rep_2156_c_10 Rep_2156_c_10_260 298872 300497 - 3.A.1.121.4
NULL(UNKNOWN) Rep_2156_c_10 Rep_2156_c_10_261 300663 300845 - NULL(UNKNOWN)
[View Structural Homologs]
TC Rep_2156_c_10 Rep_2156_c_10_262 301030 302316 + 9.A.40.2.4
pfam Rep_2156_c_10 Rep_2156_c_10_263 302520 303227 + DUF1836
TF Rep_2156_c_10 Rep_2156_c_10_264 303271 303588 - Trp_repressor
CAZyme Rep_2156_c_10 Rep_2156_c_10_265 303652 305154 - GH13_5
Gene ID: Rep_2156_c_10_256
Type: TC
Location: 293816 - 294676 (-)
Gene ID: Rep_2156_c_10_257
Type: TC
Location: 294686 - 295630 (-)
Gene ID: Rep_2156_c_10_258
Type:
Location: 295746 - 297197 (-)
Gene ID: Rep_2156_c_10_259
Type:
Location: 297776 - 298771 (+)
Gene ID: Rep_2156_c_10_260
Type: TC
Location: 298872 - 300497 (-)
Gene ID: Rep_2156_c_10_261
Type:
Location: 300663 - 300845 (-)
Gene ID: Rep_2156_c_10_262
Type: TC
Location: 301030 - 302316 (+)
Gene ID: Rep_2156_c_10_263
Type: pfam
Location: 302520 - 303227 (+)
Gene ID: Rep_2156_c_10_264
Type: TF
Location: 303271 - 303588 (-)
Gene ID: Rep_2156_c_10_265
Type: CAZyme
Location: 303652 - 305154 (-)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

Loading chart...

No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

← Back to Cluster List