Cluster: Rep_2156_CGC34
🧬 Cluster Details
- Gene Count: 6
- CAZyme Count: 2
- Substrate:
- Genome ID: Rep_2156
- CGC Family ID: CGCFAM_00075
- Continent: NA
- Source Study: Leviatan et al., 2022 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| CAZyme | Rep_2156_c_16 | Rep_2156_c_16_65 | 85750 | 86712 | - | GT2 |
| NULL(UNKNOWN) | Rep_2156_c_16 | Rep_2156_c_16_66 | 86760 | 87782 | - |
NULL(UNKNOWN)
[View Structural Homologs] |
| TC | Rep_2156_c_16 | Rep_2156_c_16_67 | 88074 | 90650 | - | 3.A.9.1.2 |
| NULL(UNKNOWN) | Rep_2156_c_16 | Rep_2156_c_16_68 | 90843 | 92339 | - |
NULL(UNKNOWN)
[View Structural Homologs] |
| NULL(UNKNOWN) | Rep_2156_c_16 | Rep_2156_c_16_69 | 92485 | 94776 | - |
NULL(UNKNOWN)
[View Structural Homologs] |
| CAZyme | Rep_2156_c_16 | Rep_2156_c_16_70 | 94936 | 96384 | - | GH1 |
Gene ID: Rep_2156_c_16_65
Type: CAZyme
Location: 85750 - 86712 (-)
Type: CAZyme
Location: 85750 - 86712 (-)
Gene ID: Rep_2156_c_16_66
Type:
Location: 86760 - 87782 (-)
Type:
Location: 86760 - 87782 (-)
Gene ID: Rep_2156_c_16_67
Type: TC
Location: 88074 - 90650 (-)
Type: TC
Location: 88074 - 90650 (-)
Gene ID: Rep_2156_c_16_68
Type:
Location: 90843 - 92339 (-)
Type:
Location: 90843 - 92339 (-)
Gene ID: Rep_2156_c_16_69
Type:
Location: 92485 - 94776 (-)
Type:
Location: 92485 - 94776 (-)
Gene ID: Rep_2156_c_16_70
Type: CAZyme
Location: 94936 - 96384 (-)
Type: CAZyme
Location: 94936 - 96384 (-)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Lachnospirales
Family
Lachnospiraceae
Genus
Coprococcus
Species
Coprococcus sp900548215
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.